Pairwise Alignments

Query, 660 a.a., tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain from Pseudomonas stutzeri RCH2

Subject, 655 a.a., tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein from Dechlorosoma suillum PS

 Score =  394 bits (1013), Expect = e-114
 Identities = 261/657 (39%), Positives = 336/657 (51%), Gaps = 38/657 (5%)

Query: 7   PDTFQH---AELDWDENGLPQSRQYGDVYFSRASGLAETEHVFLAQNELARRFAALQSNQ 63
           PD ++    A L  ++ G+P S  Y D+Y + A  L +  HVFLA N L RR+   Q  +
Sbjct: 17  PDAYRPLVPARLCRNDAGVPYSPDYDDIYHTAAGALGQARHVFLAGNGLPRRW---QQRE 73

Query: 64  HLVIGETGFGTGLNFLCAWQLFERTADAQAHLHFVSVEKHPLNHDDMQRALALWPELQPQ 123
              I ETGFG GLNFL  W  +     A   LHFVS+EKHP +  D+    A  PEL   
Sbjct: 74  SFTIVETGFGIGLNFLATWAAWRDDPAACRRLHFVSLEKHPFSAADLGELHAAHPELAEL 133

Query: 124 AAQLLQQYVALNPGFQRFVFAGGRVVLTLLIGDVLDCLPSLDARVDAWFLDGFAPAKNPQ 183
           AA+L  Q+  L PG  R  FAGGRV LTL  GD    LP L    DA++LDGFAPAKNP 
Sbjct: 134 AAELRAQWPLLTPGVHRLHFAGGRVSLTLFFGDAQSLLPQLRLAADAFYLDGFAPAKNPD 193

Query: 184 MWQPALFAELARLSAPGATLGTFTSAGFVRRGLVEAGFDMQRVPGYGHKREILRGRLLAV 243
           +W P +F  LAR +A GATL T++ A  VR GL   GF   + PG+G KR++L+G+    
Sbjct: 194 LWSPFVFRGLARCAAAGATLATWSVAAGVREGLQAVGFVSDKAPGFGGKRDMLQGQYRGP 253

Query: 244 ANPVSDKPWFARPNHGITERRAVVIGAGLAGCATAASLAARGWQVSVLERHAEAAQEGSG 303
               +  P           +R +VIGAG AG +TA  LA RG+QV++L++        SG
Sbjct: 254 GVRRTVMP----------GKRILVIGAGFAGTSTAHRLAERGYQVTLLDQAEGPGCGASG 303

Query: 304 NPQGVLYLKLSAHGTALSRLVVSGFSYTRRLLANLQAG---QDWQACGVLQLCYDDKERE 360
           N  GVL    S     LSRL  S F YTRR L  L A      W A GVL L  D     
Sbjct: 304 NRVGVLRPLPSLDDNRLSRLTRSAFLYTRRHLLALSAAGLPVRWGASGVLHLARDKTHEA 363

Query: 361 RQAELAEAFPA-SLVHPLSHEAAEALAGVRLPAGGLFYPDAGWANPPALCHWLLQ-QPGI 418
            Q ++AE F A  L   +    +  L G  +  GG  +P  GW  PP+LC   LQ  P I
Sbjct: 364 TQRQVAETFAAPELFRYVDATESSRLIGWPVSVGGWHFPGGGWGMPPSLCQANLQAHPAI 423

Query: 419 ELLQHHEALELQRNGQSWQVLAGE-KVLADAPVVVLAGAADAARFSQSAWLPLKRIRGQI 477
           E        +L+     W   A +  +LA+A  VVLA AADA R     WLPL+  RGQ 
Sbjct: 424 EQRYGQRVEKLEAGADGWAAYAADGTLLAEADQVVLANAADARRLGGCDWLPLRSARGQA 483

Query: 478 SCLPANAESGQLRTVLCAKGYVAPPRDGTHTLGASFNFQQTDDAPSIAEHQANLEMLEQI 537
           + +P  A +  L  V+C  GYV PP DG    GASF     D  P + E Q NL  L  I
Sbjct: 484 TLVPETA-TPPLDMVVCRLGYVTPPLDGLRVCGASFLAGDEDPLPRLEEQQDNLAKLNFI 542

Query: 538 SSDLYQRLQADPQQTAALQGRVAFRCTSPDYLPLIGPLAEPQAFADTYAALAKNARQSQH 597
                + L A     A L  RV FR  SPD LP++GPL E              A  ++ 
Sbjct: 543 LPGFAKDLAA-----ADLGSRVGFRPISPDRLPMLGPLPEN----------TTPATGARL 587

Query: 598 AACPWLEGLYVNTAHGSRGMISAPLSGELLAAWLNDEPLPLPREVAEACHPNRFLLR 654
              P   GL++ +  G+RG + +  +GE LA+ +  +PLPL  ++A+A  P RFLL+
Sbjct: 588 QTLPRRPGLWLASGFGARGFVWSAWAGEFLASQIAGDPLPLEGDLADALDPARFLLK 644