Pairwise Alignments

Query, 249 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

Subject, 258 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 80.9 bits (198), Expect = 2e-20
 Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 15/224 (6%)

Query: 22  AQAPVKIDLLTENFPPYNMAADGKNFARDEHISGIAVDIVREMFKRAGIDYSLTLRF--P 79
           AQ    +   TEN+PP N A +      D   +GIAVD++ E      +  +L   F  P
Sbjct: 25  AQGLESLTYYTENYPPLNFAKE------DGKPAGIAVDLLLEAAAAVNVTLNLDQIFVQP 78

Query: 80  WERIYGMALEQANYGVFVTARLPEREELFKWVGPIGPDDWVLLARGDSPINLTSLEQASQ 139
           W R Y  AL + +  +F T R   RE LF WVGPI     V+LAR  S I +    +   
Sbjct: 79  WPRSYRSALLKQDGVLFSTTRTTHRENLFNWVGPIADIKVVVLARKSSQIKVNDPIELGN 138

Query: 140 YNVGAYKGDAIAEHLEGQGLKPVLALRDQENV----KKLIDGKIDLWATGDPAGRYLARL 195
           Y +G  + D   + L   G+ P  ++ +   V    ++L+  +IDL A  +    +    
Sbjct: 139 YRIGVIRDDIGEQQLLQLGV-PRESMVEGSTVSSLAEQLLKKRIDLLAYDERTALWWMSQ 197

Query: 196 EG--VTGLKRVLRFDNAELYLALNKQVDDETVQKLQQALDQMRS 237
           +   V   + V       LY A NK +D   +  LQ+ ++ +++
Sbjct: 198 DSYPVEEFETVYVLMQGSLYYAFNKNIDKSVLNDLQKGIELIKN 241