Pairwise Alignments

Query, 592 a.a., copper-resistance protein, CopA family from Pseudomonas stutzeri RCH2

Subject, 458 a.a., copper oxidase from Pseudomonas fluorescens FW300-N2E3

 Score =  115 bits (288), Expect = 4e-30
 Identities = 82/265 (30%), Positives = 120/265 (45%), Gaps = 51/265 (19%)

Query: 43  SGSEFDLTIDSMSVDFT-GKRRTAMAINGSIPGPLLRWREGDTVTLRVRNRLPQDTSIHW 101
           +G +++L    + V+   G +  A A   S PG  LR R+G+ + +R  N LP  T+IHW
Sbjct: 38  AGHDYELIAAPLDVELVPGHKTEAWAFGPSAPGTELRVRQGEWLRVRFINHLPVPTTIHW 97

Query: 102 HGILLPANMDGVPGFSFAGIAPDGMYEYRFKVIQSGTYWYHSHSGFQEQL--GVYGPLII 159
           HGI LP  MDGVP  S   + P   ++Y+F+V  +G+YWYH H    E+L  G+ GPLII
Sbjct: 98  HGIRLPLEMDGVPYVSQLPVLPGEYFDYKFRVPDAGSYWYHPHVNSSEELGRGLVGPLII 157

Query: 160 DPKEPEPFSYERDYVVFLSDW-TDESPARVLAKLKKQADYYNQGRRTLGDFINDVADKGW 218
           + +EP  F YE+   + L  W  DE  A V   + ++A       R              
Sbjct: 158 EEREPTGFKYEK--TLSLKSWHVDEEGAFVPFSVPREAARGGTAGR-------------- 201

Query: 219 RETFSDRWAWAKMNMSPTDLADISGATYTYLLNGQAPDGNWTGVFQSGERIRLRLINGSA 278
                              LA I+G     +   + P G  T         R+RL+N   
Sbjct: 202 -------------------LATINGVPLPVI---ELPAGQIT---------RVRLLNLDN 230

Query: 279 MSYFDFRIPGLKLTVVAADGQNVEP 303
              +   IPG++  + A DG  +EP
Sbjct: 231 TLTYRLNIPGVEAQIYALDGNPIEP 255



 Score = 52.4 bits (124), Expect = 4e-11
 Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 2/102 (1%)

Query: 491 SWSFDGIPFADAEPIRLKYGERVRFVLVNDTMMHHPIHLHGLWSDLEDENGNFKVRKHTI 550
           +W       AD     LK G+   F L N T   HP+HLHG+   +   N    +   T 
Sbjct: 356 AWDITDKTCADRPIATLKKGKSYIFELKNMTQYQHPVHLHGMSFKVIASNRKKIIPYFTD 415

Query: 551 DMPPGSKRSYRVS--ADALGRWAYHCHMLMHMDLGMFREVRV 590
               G     +V+  AD  G W +HCH++ HM+ G+   + V
Sbjct: 416 TYLLGKNERAQVALVADNPGVWMFHCHVIDHMETGLMAAIEV 457



 Score = 35.4 bits (80), Expect = 5e-06
 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 5/93 (5%)

Query: 491 SWSFDGIPFADAEPIRLKYGERVRFVLVNDTMMHHPIHLHGLWSDLEDENGNFKVRKHTI 550
           +W+F   P A    +R++ GE +R   +N   +   IH HG+   LE +   +  +   +
Sbjct: 61  AWAFG--PSAPGTELRVRQGEWLRVRFINHLPVPTTIHWHGIRLPLEMDGVPYVSQ---L 115

Query: 551 DMPPGSKRSYRVSADALGRWAYHCHMLMHMDLG 583
            + PG    Y+      G + YH H+    +LG
Sbjct: 116 PVLPGEYFDYKFRVPDAGSYWYHPHVNSSEELG 148