Pairwise Alignments

Query, 443 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Pseudomonas stutzeri RCH2

Subject, 663 a.a., nitrate transport ATP-binding subunits C and D from Synechococcus elongatus PCC 7942

 Score =  204 bits (518), Expect = 9e-57
 Identities = 130/402 (32%), Positives = 211/402 (52%), Gaps = 23/402 (5%)

Query: 40  LGMRSAAWAAGGDVETSKAKLGFIALTDAAPLFVAAEKGLFAKYGMTEVEVLKQSSWGTT 99
           L  R     A   +E    ++G++ L   APL VA EK  FAK+G+ EV +++++SW   
Sbjct: 263 LNARKVTTVARHGLEKVNLEIGYVPLMACAPLVVAQEKAFFAKHGLDEVSLVRETSWR-- 320

Query: 100 RDNLVLGSAKNGIDGAHILTPMPYLISAGIVTPNNQPVAMSILARLNLAGQCISVGEEYR 159
              +V G  +N +D A +   MP  +S G    +  P+  S+    N  G  I++ +   
Sbjct: 321 --GIVDGLTENYLDAAQMPAGMPVWMSVGGQGGSPLPIVSSLTMSRN--GNGITLSKALY 376

Query: 160 DLKIGLDSTPFKAALEAKKASGKKVSAAMTFPGGTHDLWMRYWLAAGGIDPNADINTIVV 219
           D  I      F+  L  +  + K+    +  P   H+L +RYWLAA  IDP+ D+    +
Sbjct: 377 DEGIQTVDD-FRNLL--RSTADKQHIMGIVHPASMHNLLLRYWLAANQIDPDRDVQLRTI 433

Query: 220 PPAQMVANMKVGSMDTFCVCEPWNAQLINQKIGYTANTTGELWHNHPEKAFALRSDYVAT 279
           PPAQMVA++K G++D +C+ EPWNA    ++IG+T  +  E+W+ HP K   +R D+   
Sbjct: 434 PPAQMVADLKDGTIDGYCIGEPWNAWAAQKEIGFTIASDLEIWNGHPGKVLGVREDWANR 493

Query: 280 NPNAAKALTMAIMEAQQFCEKAENKEEVAKICSQRKWIGAPYKDIVDRMKGNFAYGTGK- 338
            PN+  AL  A++EA Q+CE   N +E+ ++ S R+++  P + I       F+  T   
Sbjct: 494 YPNSHVALVKALLEACQYCEDPANWDELRELLSDRRYLSCPKEYI------QFSQSTADD 547

Query: 339 -VIENHPEQMRYWDDHASYPFQSHDLWFLTENKRWGYLPTDFDSQALIAKVNREDIWRAA 397
             + +H    R+     + P ++  LW +T+  RWG +P   +   ++ +V R  ++  A
Sbjct: 548 LAVPHH----RFAGAGVNRPSRTEHLWMMTQLARWGDVPFPRNWVEILERVCRVGVFSTA 603

Query: 398 AGELNLPAELIPTSTSRGVEKFFDGKVFDPENPQAYLDSLTI 439
           A EL L +E++    S  VE  FDG  F+ E+P AYL+SL I
Sbjct: 604 ARELGL-SEVVNYQRSTPVE-LFDGVPFNAEDPIAYLNSLPI 643