Pairwise Alignments

Query, 443 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Pseudomonas stutzeri RCH2

Subject, 659 a.a., nitrate transport ATP-binding subunits C and D from Synechococcus elongatus PCC 7942

 Score =  168 bits (425), Expect = 5e-46
 Identities = 117/406 (28%), Positives = 198/406 (48%), Gaps = 29/406 (7%)

Query: 43  RSAAWAAGGDVETSKAK---LGFIALTDAAPLFVAAEKGLFAKYGMTEVEVLKQSSWGTT 99
           R+ A A    V  S+ K   LGF+   D APL +A E GLF   G++ VE+    +W   
Sbjct: 263 RAKAAAPAPAVAASQQKTVRLGFLPGNDCAPLAIAQELGLFQDLGLS-VELQSFLTWEAL 321

Query: 100 RDNLVLGSAKNGIDGAHILTPMPYLISAGIVTPNNQPVAMSILARLNLAGQCISVGEEYR 159
            D++ LG     ++GA ++   P  ++ G+    ++P A++    ++  G  I++   Y 
Sbjct: 322 EDSIRLGQ----LEGALMMAAQPLAMTMGL--GGHRPFAIATPLTVSRNGGAIALSRRY- 374

Query: 160 DLKIGLDSTPFKAALEAKKASGKKVSAAMTFPGGTHDLWMRYWLAAGGIDPNADINTIVV 219
            L  G+ S   +   +   A+ +++  A+  P     L +RYWLA+ G++P  D+  + +
Sbjct: 375 -LNAGVRS--LEDLCQFLAATPQRLRLAIPDPIAMPALLLRYWLASAGLNPEQDVELVGM 431

Query: 220 PPAQMVANMKVGSMDTFCVCEPWNAQLINQKIGYTANTTGELWHNHPEKAFALRSDYVAT 279
            P +MV  +K G +D F   E   A  +     Y   T  ++W  HPEK   L   ++  
Sbjct: 432 SPYEMVEALKAGDIDGFAAGEMRIALAVQAGAAYVLATDLDIWAGHPEKVLGLPEAWLQV 491

Query: 280 NPNAAKALTMAIMEAQQFCEKAENKEEVAKICSQRKWIGAPYKDIVDRMKGNFAYGTGKV 339
           NP  A AL  A+++A + C+    ++ + ++  Q +++G+    ++ R    F +G G  
Sbjct: 492 NPETAIALCSALLKAGELCDDPRQRDRIVEVLQQPQYLGSAAGTVLQRY---FDFGLG-- 546

Query: 340 IENHPEQM----RYWDDHASYPFQSHDLWFLTENKRWGYLPTDFDSQALIAKVNREDIWR 395
             + P Q+    ++  D A+YP      W LT+  RWG  P   + Q L+ +V R DI+ 
Sbjct: 547 --DEPTQILRFNQFHVDQANYPNPLEGTWLLTQLCRWGLTPLPKNRQELLDRVYRRDIYE 604

Query: 396 AAAGELNLPAELIPTSTSRGVEKFFDGKVFDPENPQAYLDSLTIKA 441
           AA   +  P   + T + RG E  FD   FDP++P  YL+   IKA
Sbjct: 605 AAIAAVGFP---LITPSQRGFE-LFDAVPFDPDSPLRYLEQFEIKA 646