Pairwise Alignments

Query, 289 a.a., nitrate ABC transporter, permease protein from Pseudomonas stutzeri RCH2

Subject, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score =  141 bits (355), Expect = 2e-38
 Identities = 77/242 (31%), Positives = 144/242 (59%), Gaps = 11/242 (4%)

Query: 45  LLVLGVI-WEMLCSGADAALPPPSQVVAETWELIIDPFYDNGGNDVG---LAWQLLASLQ 100
           L ++G++ WE L      A+   + V+    E +I    + G   +G   L    + S++
Sbjct: 9   LPIIGILAWEAL------AIYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVSIK 62

Query: 101 RVAVGYLLAVVAGVGLGVLIGQSDWAMRGLDPIFQVLRTVPPLAWLPLSLAGFQDSHPSA 160
           RV +G+ +A    + LG+L+G         D   ++LR +PPLAW+PL+LA F     S 
Sbjct: 63  RVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSM 122

Query: 161 LFVIFITAIWPIIINTAVGIRNIPQDYRNVAQVLQLNGFEYFKTIMLPAAAPYIFTGLRI 220
            F+IFI A +PI+INT  G++++P      A+ L  +  +  K++++PA++P I TGLR+
Sbjct: 123 HFIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRV 182

Query: 221 GVGLSWLAIIAAEMLIGG-VGIGFFIWDAWNASRISDIILALVYIGVVGFVLDRLVAFVG 279
           G G++W+ ++AAEML G   G+G+ I  A++ S+++ ++ +++ IG++G +LD+ + ++ 
Sbjct: 183 GAGIAWMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYIE 242

Query: 280 QR 281
           ++
Sbjct: 243 KK 244