Pairwise Alignments

Query, 260 a.a., nitrate transport ATP-binding subunits C and D from Pseudomonas stutzeri RCH2

Subject, 561 a.a., nitrate ABC transporter, ATPase subunits C and D (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  254 bits (648), Expect = 4e-72
 Identities = 130/253 (51%), Positives = 178/253 (70%), Gaps = 1/253 (0%)

Query: 3   YLSIEHLDKSFVRGNLASQVLKDINLNIAKGEFISIIGHSGCGKSTVLNIVAGLLDPSLG 62
           +L    L K +        V++D +L + KGEFIS+IGHSGCGKSTVL + AGL + S G
Sbjct: 290 FLDFSQLHKVYPTPKGPLTVVEDFDLKLNKGEFISLIGHSGCGKSTVLTMAAGLNEISKG 349

Query: 63  GVILDGKEVRGPGPDRSMVFQNHSLLPWLTVYENVEVAVNKLFKRSMNKRERREWIEHNL 122
            + LDG+ V G  P+R++VFQ+ SL PWLT  ENV V V++++  + ++ ER++ +E+ L
Sbjct: 350 AIKLDGRHVEGADPERAVVFQSPSLFPWLTARENVSVGVDRVYPNA-SQAERQDVVEYYL 408

Query: 123 ALVNMGHALNKYPQEISGGMKQRVGIARALAMKPKVLLLDEPFGALDALTRAHLQDEVMK 182
             V +  +++K   E+S GMKQRVGIARA A+ PK+LLLDEPFG LD+LTR  LQ+ +M+
Sbjct: 409 ERVGLADSMSKSGAELSNGMKQRVGIARAFALSPKLLLLDEPFGMLDSLTRWELQEVLME 468

Query: 183 IQKDLGNTMMMITHDVDEAVLLSDRIVMMTNGPSATIGEILEVKLPRPRDRIALADDPEY 242
           +      T + +THDVDEA+LL+DR+VMMTNGP ATIG+I +V LPRPR R AL + P+Y
Sbjct: 469 VWSRTKVTAICVTHDVDEAILLADRVVMMTNGPRATIGKITDVNLPRPRTRKALLEHPDY 528

Query: 243 NHYRRAVLSFLHE 255
             YR+ VL FL E
Sbjct: 529 YTYRQEVLDFLEE 541



 Score =  224 bits (571), Expect = 3e-63
 Identities = 111/253 (43%), Positives = 173/253 (68%), Gaps = 3/253 (1%)

Query: 1   MSYLSIEHLDKSFVRGNLASQVLKDINLNIAKGEFISIIGHSGCGKSTVLNIVAGLLDPS 60
           M+ +  +++ KSF  G   + VL+DINL + +GEF+ ++G SG GK+T++N++AGL  P+
Sbjct: 1   MTAIEFKNVSKSFGSGPNRADVLRDINLTVKEGEFLVLLGFSGTGKTTLINLMAGLEVPT 60

Query: 61  LGGVILDGKEVRGPGPDRSMVFQNHSLLPWLTVYENVEVAVNKLFKRSMNKRERREWIEH 120
            G V+  G ++  P P+R ++FQN+SL+PWLTV  NV +AV+ +F + ++K  R+  ++H
Sbjct: 61  KGEVLFKGAQITEPSPERGVIFQNYSLMPWLTVNGNVRLAVDTMFPK-LSKAARQAKVDH 119

Query: 121 NLALVNMGHALNKYPQEISGGMKQRVGIARALAMKPKVLLLDEPFGALDALTRAHLQDEV 180
            + +V + HA  + P E+SGGM+QRV +ARALAM P+VLLLDEP  ALDALTRA+L DE+
Sbjct: 120 YVKMVGLCHATTRRPAELSGGMRQRVNVARALAMNPEVLLLDEPLSALDALTRANLADEI 179

Query: 181 MKIQKDLGNTMMMITHDVDEAVLLSDRIVMMTNGPSATIGEILEVKLPRPRDRIALADDP 240
             I +    T ++IT+DVDEA++L+DRI+ +   P  T+G+   V +PRPRDR+ +    
Sbjct: 180 EGIWEKEKKTCVLITNDVDEAIVLADRIIAL--NPDGTLGDEFAVTIPRPRDRVEMNTHV 237

Query: 241 EYNHYRRAVLSFL 253
            +   R  +  +L
Sbjct: 238 GFKKLRADITKYL 250