Pairwise Alignments

Query, 476 a.a., Putative Zn-dependent protease, contains TPR repeats from Pseudomonas stutzeri RCH2

Subject, 489 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  236 bits (601), Expect = 2e-66
 Identities = 157/458 (34%), Positives = 244/458 (53%), Gaps = 7/458 (1%)

Query: 22  NDLPSLGDASSGIVSPEQEHLLGRAWLSLLRGQVRQLSDPQLKDYVENSVYRLAETSQLQ 81
           NDLP LG A+    S E+E + G A++ ++R     L+DP L  Y+     +L   +   
Sbjct: 33  NDLPDLGTAAVNTFSLEKEMIYGDAYMRVIRSSAPMLNDPVLSQYLTELGNKLVAHATGV 92

Query: 82  DRRLEFVLLDSPQLNAFAAPGGIIGVNGGLFIHAQTEAEYASVMAHELAHLSQRHFARGL 141
                F LL + ++NAFA  GG + V+ GLF++A  E+E ASV+ HE+ H++QRH AR L
Sbjct: 93  KTPFYFFLLQNDEINAFAFFGGHVAVHTGLFLNADNESELASVLGHEITHVTQRHLARSL 152

Query: 142 EAQQRMQLPLMAAMLAGVVAAAAGAGDAGIAAIVSTQAAAIQAQRRFSRQNEQEADRIGI 201
           EAQQ+   P   A L G +        AG+AA+ +TQA A Q++  ++R +E+EADRIG+
Sbjct: 153 EAQQKTG-PATVAGLLGAILLTIAVPQAGMAALATTQAMATQSKINYTRLHEKEADRIGM 211

Query: 202 VNLERAGYDPRAMPSMFGRLMRQYRYDQKPPEFLLTHPVSESRIADTTNRAEQYPQGGAQ 261
             L  AG+DP A    FG+L  +YR+   PP+ LLTHP+ ESRI++  +RA+QYP     
Sbjct: 212 QILVDAGFDPNASAEFFGKLASRYRFTTTPPQMLLTHPLPESRISEARDRAQQYPHRYVP 271

Query: 262 DSLRYQLMRARTQLKFES-TPGVEAKRFRAMLNENPE--MDAARYGLALAQIKAGQLTEA 318
           D+L +QL +AR Q++F S +       F   LN+      +AA YG ALA  +  +  E+
Sbjct: 272 DNLNFQLAKARIQVRFSSFSDDAVLSMFEKQLNKQTYGFKEAALYGKALALFRLKKFDES 331

Query: 319 SSSLAPLLTKAPDDLTYNLAQVELDITSNRLQQAQTRLQRLLQLYPGNYPVRQMHIDLLM 378
              +  LL    ++L Y   + +L        QA   L+    L P +  +     ++ +
Sbjct: 332 EKIVDELLKIDDNNLFYIDTKTDLLNERKDYAQAIKLLEAQRNLKPTSQVINANLANIYI 391

Query: 379 EQGETQQAERELDKLAEQRRRDPDIWYQVAEVRGLS-GNIVGLHQARAEYFALVGDYDQG 437
           E GE  +A   L+ +    +++  + YQ+  +     GN    + + AE  AL  +Y   
Sbjct: 392 EAGEPAKAIPLLEDMIFLDKQN-QLPYQLLNLAYKKLGNPGMEYFSNAELMALGANYKGA 450

Query: 438 IEQLNLAKRRASNFQIS-ARIDARQKQLMDEKRMVEEM 474
           I+QLN A R +   Q+  ARI+AR +Q     R ++ +
Sbjct: 451 IDQLNFAYRASEGNQLQLARIEARIRQFKQADREMDAL 488