Pairwise Alignments

Query, 234 a.a., DnaA regulatory inactivator Hda from Pseudomonas stutzeri RCH2

Subject, 233 a.a., Chromosomal replication initiator protein DnaA from Xanthomonas campestris pv. campestris strain 8004

 Score =  143 bits (360), Expect = 3e-39
 Identities = 90/229 (39%), Positives = 123/229 (53%), Gaps = 4/229 (1%)

Query: 5   QLPLGVRLRDDATFANFYPGANAAALGYVERLCSPAAGWSDELIYLWGQAGVGRSHLLQA 64
           QLPL +R   D    ++     AA  G + +L + AAG   + +YL G +G G++HL  +
Sbjct: 5   QLPLALRAPSDQRLDSYI----AAPDGLIAQLQAFAAGQLSDWLYLAGPSGTGKTHLALS 60

Query: 65  ACLRVEERGEQAVYLPLAEVVEYGPALLDNLEQCELVCLDDLDAVAGDAVWEEALFHLFN 124
            C   E+ G  + YLPL          L+ LE   LV LD +D++AG    E ALF   N
Sbjct: 61  VCAAAEQAGRSSAYLPLQAAAGRLRDALEALEGRSLVALDGVDSIAGQCEDEVALFDFHN 120

Query: 125 RLRDAGRRLLLAANGSPRELPVKLPDLKSRLSLALVFQLQQLSDEDKLRALQLRASRRGL 184
           R R AG  LL  A   P  L + LPDL+SRLS  +   L  L D  +   L+ RA RRGL
Sbjct: 121 RARAAGITLLYTARQMPDGLALVLPDLRSRLSQCVRISLPVLDDVARAAVLRDRAQRRGL 180

Query: 185 NLPDDVGRFILTRGSRSMNALFELLDQLDQASLQAQRKLTIPFLKETLG 233
            L +    ++LT   R +  L  LLD+LD+ SL AQR++T+PFL+  LG
Sbjct: 181 ALDEAAIDWLLTHSERELAGLVALLDRLDRESLAAQRRVTVPFLRRVLG 229