Pairwise Alignments

Query, 234 a.a., DnaA regulatory inactivator Hda from Pseudomonas stutzeri RCH2

Subject, 467 a.a., chromosomal replication initiator protein DnaA from Vibrio cholerae E7946 ATCC 55056

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 11/226 (4%)

Query: 18  FANFYPGANAAALGYVERLCSPAAGWSDELIYLWGQAGVGRSHLLQAACLRVEERGEQA- 76
           F NF  G +        R  S   G +   ++L+G  G+G++HLL A    + +    A 
Sbjct: 138 FNNFVEGKSNQLGLAAARQVSDNPGAAYNPLFLYGGTGLGKTHLLHAVGNAIVDNNPNAK 197

Query: 77  -VYLPLAEVVEYGPALLDN---------LEQCELVCLDDLDAVAGDAVWEEALFHLFNRL 126
            VY+     V+     L N             + + +DD+   A     +E  FH FN L
Sbjct: 198 VVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNAL 257

Query: 127 RDAGRRLLLAANGSPRELPVKLPDLKSRLSLALVFQLQQLSDEDKLRALQLRASRRGLNL 186
            +  ++++L ++  P+E+      LKSR    L   ++    E ++  L  +A    ++L
Sbjct: 258 LEGNQQIILTSDRYPKEISGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKAEDHQIHL 317

Query: 187 PDDVGRFILTRGSRSMNALFELLDQLDQASLQAQRKLTIPFLKETL 232
           PD+V  FI  R   ++  L   L+++   +    R +TI F++E L
Sbjct: 318 PDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREAL 363