Pairwise Alignments

Query, 234 a.a., DnaA regulatory inactivator Hda from Pseudomonas stutzeri RCH2

Subject, 459 a.a., chromosomal replication initiation protein (RefSeq) from Shewanella loihica PV-4

 Score = 70.9 bits (172), Expect = 4e-17
 Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 21/231 (9%)

Query: 18  FANFYPGAN-----AAALGYVERLCSPAAGWSDELIYLWGQAGVGRSHLLQAACLRVEER 72
           F NF  G +     AAAL   E   +P   ++   ++L+G  G+G++HLL A    + + 
Sbjct: 130 FDNFVEGKSNQLGKAAALQVSE---NPGGAYNP--LFLYGGTGLGKTHLLHAVGNGIIKN 184

Query: 73  GEQA--VYLPLAEVVEYGPALLDN---------LEQCELVCLDDLDAVAGDAVWEEALFH 121
              A  VY+     V+     L N             + + +DD+   A     +E  FH
Sbjct: 185 NPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDRSQEEFFH 244

Query: 122 LFNRLRDAGRRLLLAANGSPRELPVKLPDLKSRLSLALVFQLQQLSDEDKLRALQLRASR 181
            FN L +   +++L ++  P+E+      LKSR    L   ++    E ++  L  +A  
Sbjct: 245 TFNALLEGNHQVILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAILMRKAQE 304

Query: 182 RGLNLPDDVGRFILTRGSRSMNALFELLDQLDQASLQAQRKLTIPFLKETL 232
            G+NLPD+V  FI  R   ++  L   L+++   +    R +TI F++E L
Sbjct: 305 SGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREAL 355