Pairwise Alignments

Query, 349 a.a., Uncharacterized protein conserved in bacteria from Pseudomonas stutzeri RCH2

Subject, 360 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 77.8 bits (190), Expect = 4e-19
 Identities = 82/347 (23%), Positives = 154/347 (44%), Gaps = 31/347 (8%)

Query: 21  QAEQLRGLYQVREAVSGQQAEERAAALQRAFDTLLLRLTGDAQVAKRQEVAALREDPQQL 80
           QA ++  L +    V+ +   ER +AL+ A + ++++ TG A+      + +   +P+ L
Sbjct: 24  QAVEVSKLDEADVPVTSRAVPERNSALKTALEKVIIKNTGTARSLDNSVIQSQLANPEAL 83

Query: 81  IRKYGYEGEH----IVVDFDPGTTERSLRRAGVSLWGSNRPTLLVWWLNERVEGTQLLGD 136
           + ++GY  ++    +  +F+       LR+A + +WG+ RP  L W        T LL D
Sbjct: 84  LSQFGYVEQNGQLLLKANFEHRRIVSLLRQAQLPVWGTQRPLTLFWVAMPSEGDTILLSD 143

Query: 137 GQDGAAP--LRAAAQHRGLPVRLPLADLSEQLLATPDAFGANSRQVLGDASERYDAD--V 192
               A        +  RG+PV LP+ DL E +   P+        ++   S RY AD   
Sbjct: 144 SSSLAERKVFSTFSDERGIPVLLPILDLDELMGINPNDVKGMFADIVASVSGRYQADFLA 203

Query: 193 LLAVHAREADPAWQGDW--KVWLDDEAHDGKAKADSLEGLADAV---LLAVSQYLAPRYV 247
           L+A+    +   ++ +   K  +D           S E  A A+   + A+  Y   +Y 
Sbjct: 204 LMAIDPEGSRVRYRLNLYSKTTIDSLTPPLFTFNGSAENSAQAITAMMAALGDYYFTKYA 263

Query: 248 VA-PGAASDITLEIIGAD-VARFAELDRLLEPF----GGSLLRVESDRLVYRVNASPEQL 301
           +A  G     ++  +  D +A+  E+++ L+        +L R++ + + + +    +  
Sbjct: 264 IADSGEQVGASVTFVNIDKMAQVVEVEKYLKQLSAVKNATLSRIQGNTVTFTL----DLF 319

Query: 302 RAQLSLARLQEVPEDEPPLDASQPVVEPGDGAGASAAPQGGTVLRFR 348
            +Q    RL  +   EP +     VV PG+   ASA+P G TV ++R
Sbjct: 320 GSQTDFERLLSL---EPRIS----VVAPGE-FSASASPAGKTVYQWR 358