Pairwise Alignments

Query, 255 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

Subject, 252 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E2

 Score = 51.2 bits (121), Expect = 2e-11
 Identities = 61/261 (23%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 8   MLLALALPVGYSHAEQVRFVTEDFPPFTFAATTAPIDTPAGPFVDVIGAVCAQLRIDCPI 67
           +L+ LA  V  + A  +R VTE+ PP+             G   +V+ AV  ++ +D PI
Sbjct: 13  VLMFLAASVCAAEAP-LRIVTEELPPYNMTQN----GRMTGMSTEVVQAVLKEVGMDAPI 67

Query: 68  QLLPWRRALALAEGGEVDGIFTVIRSPERERAFHLTRMLVTSRYGVYARSASRFVFHRPE 127
             +PW RA  LA       I++++R+P RE  F     +  +++ +Y+ +          
Sbjct: 68  HSMPWARAYELALNESNVLIYSIVRTPAREPLFQWVGSIGPTQWYIYSLADRPVKLDSLA 127

Query: 128 DLAGRTVAVYGPS-------GTSFVLGQHL------------TKVADVELILESDNRRLM 168
           D  G  +A               F +G+ L             KV  VEL + ++   L 
Sbjct: 128 DAHGHQIATVNQDVGEQYLVSKGFRIGEELQSSTKYEHNYRKLKVDHVELWISNELNALY 187

Query: 169 RMLQAGRFGEQGVAVVNQDVAWHLIEQERLADIHEAGELQAVSYAIGLSRAAVSEAEFKR 228
              Q G           +D    LI    L ++  A  L     ++  SR   ++   K 
Sbjct: 188 LTRQNG-----------EDPDKLLIRSLALPELSSADGL-----SMAFSRNTPADTVAK- 230

Query: 229 FNQALESLIADGTVSRILRRY 249
           F   LE++  +G    ILR++
Sbjct: 231 FRAGLETIRRNGVYDAILRKW 251