Pairwise Alignments

Query, 255 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

Subject, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 57/253 (22%), Positives = 104/253 (41%), Gaps = 22/253 (8%)

Query: 7   AMLLALALPVGYSHAEQVRFVTEDFPPFTFAATTAPIDTPAGPFVDVIGAVCAQLRIDCP 66
           A L+++ L    + A+ +    + +PPF             G  VD++ A  A       
Sbjct: 6   ATLISVVLCSFSAWAQTITAAQDPWPPFVMENAQQK-----GLSVDIVTAAFATQGYTVE 60

Query: 67  IQLLPWRRALALAEGGEVDGIFTVIRSPERERAFHLTRMLVTSRYGVYARSASRFVFHRP 126
             ++PW RAL   + G++D +     + ER      +   +T++     ++   F F   
Sbjct: 61  FTIMPWSRALNDVKEGKIDILPATWFTQERTAYLTYSDNYLTNQVKFIKKAGDNFEFAGL 120

Query: 127 EDLAGRTVAV---YGPSGTSFVLGQHLTKVADVELILESDNRRLMRMLQAGRFGEQGVAV 183
             L G+ V +   YG  G  F+      +    +L      ++ ++ LQAGR     +AV
Sbjct: 121 ASLNGKKVGIVRGYG-YGDEFMNDPSFFRPESTDL------KQNLQKLQAGRI---DLAV 170

Query: 184 VNQDVAWHLIEQERLADIHEAGELQAVS----YAIGLSRAAVSEAEFKRFNQALESLIAD 239
            ++ VA  +I +  +     A   QA+S    +         SE     FN+ L  + A+
Sbjct: 171 EDELVAKSIITEAGMNLADFAFTNQAISENPLHVTSGKANPRSEELVAAFNKGLAEIKAN 230

Query: 240 GTVSRILRRYGLQ 252
           GT  ++L  YG++
Sbjct: 231 GTFDKLLADYGIK 243