Pairwise Alignments

Query, 251 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

Subject, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  193 bits (490), Expect = 3e-54
 Identities = 111/255 (43%), Positives = 155/255 (60%), Gaps = 8/255 (3%)

Query: 5   KKILLTAA--ASLIIG-TQAFAAEKLRIGTEGAYPPFNLIDASGKVVGFDLDISHALCAK 61
           KK L+  A  A+ I G TQA   + +R G EGAYPPF+  +A G + GFD+D+++ALCA+
Sbjct: 4   KKWLVATALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCAE 63

Query: 62  MKVECEVVTSDWDGIIPALNAGKFDFLAASMSVTEERKNAVDFTDHYYTNKLQFVAPKNV 121
           M+VEC++V  DWDGIIP+L A K+D + A+MS+TEERK  VDFT  Y     +F+A K  
Sbjct: 64  MQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKGA 123

Query: 122 EFQTDEGYLKGKVIGAQRATIAGTWLEDNLDRVVDIKLYDTQENAYLDLASGRVDGILAD 181
           +    +  LKG  IG QRAT    ++ DN    VDI  Y + + AYLDLA+GR+  +L D
Sbjct: 124 DLAFTKEGLKGVKIGVQRATTHDKYITDNYGDTVDIVRYGSFDEAYLDLANGRIAAVLGD 183

Query: 182 TFVQWE-WLKSDAGKNFEFKG----EPVFDDDKIAIAVRKGNDELRERLNKALAEIIADG 236
                E  L    G  +EF G    +P +  + + IAVRK + EL E+L+ A+  +   G
Sbjct: 184 ASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALREKG 243

Query: 237 TYKQINDKYFPFSIY 251
            Y+QI  KYF + +Y
Sbjct: 244 IYQQIQAKYFKYDVY 258