Pairwise Alignments

Query, 508 a.a., RecA-superfamily ATPases implicated in signal transduction from Pseudomonas stutzeri RCH2

Subject, 454 a.a., DNA repair protein RadA from Phaeobacter inhibens DSM 17395

 Score = 58.9 bits (141), Expect = 4e-13
 Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 37/273 (13%)

Query: 15  PPRISTGSEGLDDILGGGLDPNRMYLYEGSPGSGKTTIALQFLLEGVRQGERVLYVTLSE 74
           PPR   G   LD +LGGGL P    L  G PG GK+T+ LQ   +  + G + +YV+  E
Sbjct: 67  PPRTCCGVGELDRVLGGGLVPASAILVGGDPGIGKSTLLLQAAAQFAQSGLKTIYVSGEE 126

Query: 75  TKDELELVAKRHGWSLDGIDVFELVTPETSLDPDLELTVLHPVEMELSETTQQVFDRVTE 134
              ++ + A+R G +   +     +  ET+L   L        ++ + ++ Q ++    +
Sbjct: 127 ASAQVRMRAQRLGLAEAPVK----LAAETNLRDILTTLEAERPQLAIIDSIQTMWADHVD 182

Query: 135 TNPSRVIFDSLSEMRLLAQSPLRYRRQVLALKHFFTTRNCTVILLDDQTSEVGDLQLHSI 194
           + P      S+S++R  A            L  F  T   ++I++   T E        +
Sbjct: 183 SAPG-----SVSQVRAAAHE----------LTTFAKTNGVSIIMVGHVTKEGQIAGPRVV 227

Query: 195 SHGVVMLEQVAIDYGAERRRLRVIKMRGIQFRGGYHD----FAIRKGGLRIYPRLIAAEH 250
            H   M++ V    G    + R+  +R ++ R G  D    F +  GGL        +E 
Sbjct: 228 EH---MVDTVLYFEGERGHQFRI--LRAVKNRFGPADEIGVFEMTGGGL--------SEV 274

Query: 251 HSSFSGELASSGNPALDKMLGGGLERGTNALLV 283
            +  +  L+  G P+   ++  G+E GT  +LV
Sbjct: 275 RNPSALFLSERGTPSPGSVVFSGIE-GTRPVLV 306



 Score = 48.9 bits (115), Expect = 4e-10
 Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 26/224 (11%)

Query: 266 LDKMLGGGLERGTNALLVGAAGVGKSSLALSYAVAACKRGEQVAFFVFDENIATLLARGR 325
           LD++LGGGL   +  L+ G  G+GKS+L L  A    + G +  +   +E  A +  R +
Sbjct: 77  LDRVLGGGLVPASAILVGGDPGIGKSTLLLQAAAQFAQSGLKTIYVSGEEASAQVRMRAQ 136

Query: 326 ALGLPMEPWIEQGLLHLQQVDPAELSPGEFTAAVRQSVEVRGAGLVILDSLN----GYLH 381
            LGL                 P +L+       +  ++E     L I+DS+      ++ 
Sbjct: 137 RLGLAEA--------------PVKLAAETNLRDILTTLEAERPQLAIIDSIQTMWADHVD 182

Query: 382 AMPDGRFLI-LQMHELLSYLGQKGVISIMVLAQHGLVGPMDTPVDISYLSDAVIMQRYFE 440
           + P     +    HEL ++    GV SI+++      G +  P  + ++ D V+   YFE
Sbjct: 183 SAPGSVSQVRAAAHELTTFAKTNGV-SIIMVGHVTKEGQIAGPRVVEHMVDTVL---YFE 238

Query: 441 -HAGVVRRALSVVKKRSGRHENTVREYRLSSAGL-EVGPPLSHF 482
              G   R L  VK R G  +  +  + ++  GL EV  P + F
Sbjct: 239 GERGHQFRILRAVKNRFGPADE-IGVFEMTGGGLSEVRNPSALF 281