Pairwise Alignments

Query, 229 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Pseudomonas stutzeri RCH2

Subject, 276 a.a., L-lysine ABC transporter, permease component 2 (from data) from Sinorhizobium meliloti 1021

 Score =  175 bits (444), Expect = 7e-49
 Identities = 90/216 (41%), Positives = 142/216 (65%), Gaps = 2/216 (0%)

Query: 4   EIFIKWLPSFIDGAWLTLQLVGVSVIAGLIVAVPLGIARSSRHLAVRALPYGYIFFFRGT 63
           E F ++ PSF+ G  +TL LV  S++ G ++++P+ + R S++     L Y Y++FFRGT
Sbjct: 53  EKFSRYGPSFLSGLGVTLTLVISSILMGAVLSLPVALGRMSKNRLWGWLAYAYVYFFRGT 112

Query: 64  PLLVQLFLVYYGMAQFDVVRQSA-LWPYLRDPYWCAIITMTLHTAAYIAEIIRGAIQNVP 122
           PL+ QLFL+YYG+  F    ++  LW + RD + CA+ T TL+TAAY AEI+RGAI++VP
Sbjct: 113 PLITQLFLIYYGLGSFRPQLETVGLWWFFRDAWNCALFTFTLNTAAYQAEILRGAIESVP 172

Query: 123 HGEIEAARALGMSRSQALLHIILPRATRIGLPAYSNEVILMLKASALASTITLLELTGMA 182
            G+ E A ALG+    A   +ILP+A  + L  Y NE+ILM+K SA+ + +T+ +L G  
Sbjct: 173 RGQREGAAALGLPERVAFFKVILPQAMIVALRPYGNEIILMIKGSAIVAIVTVFDLMGET 232

Query: 183 RKIAARTYLHEEMFLTAGLIYLLIAFILMQGFKLLE 218
           R+  +RT+ + +M++ A ++YLL+  +L   +  LE
Sbjct: 233 RRAFSRTFDY-QMYIWAAILYLLMVELLRNIWGWLE 267