Pairwise Alignments

Query, 229 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Pseudomonas stutzeri RCH2

Subject, 239 a.a., Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) from Rhodospirillum rubrum S1H

 Score =  228 bits (581), Expect = 8e-65
 Identities = 115/223 (51%), Positives = 161/223 (72%), Gaps = 2/223 (0%)

Query: 1   MTWEIFIKWLPSFI-DGAWLTLQLVGVSVIAGLIVAVPLGIARSSRHLAVRALPYGYIFF 59
           M  ++   +LP  + +G  +TL+LV ++V  G+ +A+P  + R      VRA PY +IFF
Sbjct: 1   MNLDLVATFLPKLLFEGLPVTLKLVTLAVAIGVFIAIPTALLRVHPSPLVRAFPYAFIFF 60

Query: 60  FRGTPLLVQLFLVYYGMAQFDVVRQS-ALWPYLRDPYWCAIITMTLHTAAYIAEIIRGAI 118
           FRGTPLL+Q+ LVYYG++    +R++  LWP LR+P+WCA+I   L+T AY AEI+RGAI
Sbjct: 61  FRGTPLLIQIALVYYGLSTLPWIRENEVLWPILREPFWCALIAFALNTGAYSAEILRGAI 120

Query: 119 QNVPHGEIEAARALGMSRSQALLHIILPRATRIGLPAYSNEVILMLKASALASTITLLEL 178
           Q +P GE+EAARA GM     +  IILPRA +IGLPAY NE+IL+LK SALAS+ITLL++
Sbjct: 121 QAIPRGEVEAARAYGMRGLLIVRRIILPRAFQIGLPAYGNEIILILKGSALASSITLLDI 180

Query: 179 TGMARKIAARTYLHEEMFLTAGLIYLLIAFILMQGFKLLERWL 221
           TG+AR + AR Y   E F+TAG+IYL++ ++L +G +L+ER L
Sbjct: 181 TGVARLLYARYYTPVEAFVTAGVIYLILVYLLTRGLRLIERRL 223