Pairwise Alignments

Query, 306 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 315 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  397 bits (1020), Expect = e-115
 Identities = 196/292 (67%), Positives = 236/292 (80%)

Query: 15  QRAALARLIDGLVRDDGMHPTAIDDLFLIRCSAPSELVHGLHKPALCIIVQGSKEVRLGD 74
           +RA LA L+     + G+HPTAI+ L LIR   P+E +H +HKP LC+I++G KEVRL D
Sbjct: 18  RRAELASLMKRFAPEYGVHPTAIEALHLIRSDQPTEALHTVHKPGLCVIIEGRKEVRLAD 77

Query: 75  ELYTYDALHYLVVSVTVPVAGRVLEASSGEPYLCIRLDIDPAMVATLVAESAPLSQPVEG 134
           E Y YD L+YLVVSVT+P+AG+V+EAS   PYLCIRLDIDPA +  L+A+++P+  P E 
Sbjct: 78  ECYVYDPLNYLVVSVTLPLAGQVIEASPERPYLCIRLDIDPAQICRLIADASPIGVPTER 137

Query: 135 PARGVYLDRIDAPLLDATLRLVRLLASPQDIPVLAPLAMREIFYRLLCGRQGRHLHEIAV 194
             RG++LDRIDAPLLDA LRL+RLL SP DI  LAPLA +EIFYRLL G QG+ LHEIA+
Sbjct: 138 TGRGLFLDRIDAPLLDAVLRLLRLLDSPDDIATLAPLAQQEIFYRLLRGAQGQRLHEIAI 197

Query: 195 RDSQGHRVTRAIEWLNRNYVEPLRIEELAQRVNLSSSTLHHRFKALTAMSPLQYQKQLRL 254
            D+Q HR++RAIEWLN +Y EPL I+ LAQ +NLS S LHHRFKA+TAMSPLQYQKQLRL
Sbjct: 198 PDTQTHRISRAIEWLNTHYAEPLSIDSLAQMINLSPSALHHRFKAVTAMSPLQYQKQLRL 257

Query: 255 QEARRLLIAEGLDVSSAGYRVGYESPSQFSREYSRLFGASPVKDLARLRSTA 306
           QEARRLL+AE  DVSS GY++GYESPSQFSREYSRLFGASP KD+ARLR+ A
Sbjct: 258 QEARRLLLAENSDVSSIGYKMGYESPSQFSREYSRLFGASPSKDIARLRAQA 309