Pairwise Alignments

Query, 368 a.a., ABC-type uncharacterized transport system, permease component from Pseudomonas stutzeri RCH2

Subject, 365 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  224 bits (572), Expect = 2e-63
 Identities = 123/325 (37%), Positives = 188/325 (57%), Gaps = 3/325 (0%)

Query: 20  PLLAALLTLLSGALLFALLGHPPLETLKVLLIDPLGDLYGVSELLVKALPILLCALGLAV 79
           P  A +L L  GA L A  G+     + V+++    D   ++E+L+KA P++L  +GL V
Sbjct: 34  PAAAVVLALACGAALLAFNGYEARAVIDVMVLGVFQDTRSIAEILLKATPLILIGVGLCV 93

Query: 80  VYNARIWNIGAEGQLLIGALAGSALAVNIIDWDSRWALV-LTLLLGTLGGAAWAGLCAWL 138
            +   IWNIGAEGQ   GA+A +A  V+  D  + W  V L ++ G L GAAWA +   L
Sbjct: 94  AFRCSIWNIGAEGQFYAGAIAATAAGVSF-DGLTAWIYVPLVMIAGALAGAAWAAIAGLL 152

Query: 139 KTAFNANEILTSIMLNYIALNLLLFAVHGPLKDPEGFNFPESAMFGDATRLPELIEGLRV 198
           K  F A+EI+T+IMLNYIA+ +  + V GPL+D     +P+SA       +P ++   R+
Sbjct: 153 KVYFRASEIVTTIMLNYIAIIMTSYLVTGPLRDAAAA-YPQSARLVQEAWMPRILPPTRL 211

Query: 199 HGGFYFALLALVVVWVLLQKSFLGFQIKVLGLDKRAAGFVGFRDKKLVWIALLISGGLAG 258
           H G   AL   VV+++ L +S  G+ ++V+G+   AA + G    + + +++ +SG +AG
Sbjct: 212 HIGILVALALAVVMYIFLFRSTRGYALRVVGISPDAARYAGISVPRNIMLSICLSGSMAG 271

Query: 259 LAGVAEVTGPIGQLVPQVSPGYGYAAITVAFLGRLNPIGIVFASLLMALLYLGGENAQMA 318
           LAG  E+ G   +L   +SPGYG+  I VA L   NPIG VF+ LL A+L  G E  Q+ 
Sbjct: 272 LAGAFEIAGVTRRLFQSISPGYGFEGIAVALLANNNPIGAVFSGLLFAILRSGSELMQIT 331

Query: 319 ANLPQSITQLFQGMVLFFLLACDVL 343
           A +PQ +  + QG+V+  ++   VL
Sbjct: 332 AQVPQVLVLVIQGIVILSVVGFAVL 356