Pairwise Alignments

Query, 368 a.a., ABC-type uncharacterized transport system, permease component from Pseudomonas stutzeri RCH2

Subject, 349 a.a., ABC transporter, permease protein from Phaeobacter inhibens DSM 17395

 Score =  221 bits (564), Expect = 2e-62
 Identities = 120/347 (34%), Positives = 191/347 (55%)

Query: 3   LSLQPRGEASRAMLWFSPLLAALLTLLSGALLFALLGHPPLETLKVLLIDPLGDLYGVSE 62
           + L+P    S       P LA L T    ALL  + G  PL    ++L    G  + + E
Sbjct: 1   MRLEPIAAPSWQRRLMPPALALLATFALAALLAQIAGGEPLSIFGLILTGAFGSKFALLE 60

Query: 63  LLVKALPILLCALGLAVVYNARIWNIGAEGQLLIGALAGSALAVNIIDWDSRWALVLTLL 122
            L +A P++   L +AV + A++WNIGAE QL  GA+    L    ++  +   L L   
Sbjct: 61  TLNRATPLIFTGLAIAVAFRAKLWNIGAEAQLYAGAVITVVLGTGALNLPAPLLLPLLGA 120

Query: 123 LGTLGGAAWAGLCAWLKTAFNANEILTSIMLNYIALNLLLFAVHGPLKDPEGFNFPESAM 182
              + GA      A LKT    +E++T+++ N+I L  + + + GPLKDP G  +P+S  
Sbjct: 121 AALIAGAVLLLGPALLKTRLGVDEVVTTLLFNFIFLLFVSYLLEGPLKDPMGMGWPKSPR 180

Query: 183 FGDATRLPELIEGLRVHGGFYFALLALVVVWVLLQKSFLGFQIKVLGLDKRAAGFVGFRD 242
                RLP +++GLR+H GF  AL++ +V+WV+  ++ LG++++ +G +  AA F G   
Sbjct: 181 LSADARLPRVVDGLRLHWGFALALISALVIWVINTRTTLGYEMRAVGQNAEAARFAGIPV 240

Query: 243 KKLVWIALLISGGLAGLAGVAEVTGPIGQLVPQVSPGYGYAAITVAFLGRLNPIGIVFAS 302
            K++    L+SGGLAGLAG +EV+G  G L   +SPG+GY  I VA L  L+PIG+VFA+
Sbjct: 241 TKVILKTALLSGGLAGLAGYSEVSGLKGALTLDLSPGFGYTGIVVAMLALLHPIGVVFAA 300

Query: 303 LLMALLYLGGENAQMAANLPQSITQLFQGMVLFFLLACDVLILYRPR 349
           L +A +++G ++   AA +P  +  +     L  ++   +L  +R R
Sbjct: 301 LFVAAIFVGADSMSRAAGVPSYLADIMLASALLLMVLAILLSKFRLR 347