Pairwise Alignments

Query, 408 a.a., Arabinose efflux permease from Pseudomonas stutzeri RCH2

Subject, 388 a.a., Putative transport protein from Pseudomonas fluorescens FW300-N2E2

 Score =  275 bits (704), Expect = 1e-78
 Identities = 167/380 (43%), Positives = 228/380 (60%), Gaps = 10/380 (2%)

Query: 22  LALAMGGFAIGTGEFAIMGLMPDVAEGLGISEPQVGNVISTYALGVVVGAPLLAILGSRL 81
           +ALA+G F IG  EFA MG++P +A  LG+S P  G ++S YALGV++GAPL+ +   R+
Sbjct: 8   VALAIGAFGIGVTEFAPMGMLPGIAADLGVSIPAAGLLVSAYALGVLLGAPLMTLTTGRI 67

Query: 82  FRRHLLLLLMGFFALGNFASALAPDYSTLMIFRFITGLPHGAYFGVAMLVAASMVPPDKR 141
            RR+LL+ LM  F LGN  SALA DY +LM+ R +T L HGA+FGV  +VAAS+V P+KR
Sbjct: 68  PRRYLLIGLMAIFTLGNLMSALATDYYSLMVARVVTSLNHGAFFGVGSIVAASVVAPEKR 127

Query: 142 AQAVARVLMGLTVAILIGNPLATWLGQWASWRYAFALVGAIALLTVLLVALFLPLNRDEP 201
           A AVA + MGLT+A + G PLATW G+   WR AF  +  +  LT+  +   LP N   P
Sbjct: 128 AGAVAAMFMGLTLATIGGVPLATWFGELFGWRTAFWGITGLGGLTMAALWFALP-NLQMP 186

Query: 202 RN-SPLLEIRAFNRPQVWLALAISSIGFAGMFCVFSYMAPTLLNVTGVSAGWIPFALAAF 260
           +    L EIR   R  V  ALA++ +G   MF VF+Y+AP L N T  S  +I   L  F
Sbjct: 187 QGVGVLAEIRVLGRGPVLGALALTVVGSGAMFTVFTYIAPILSNETHASTAYITAMLVLF 246

Query: 261 GLGGIVGNLVGGWLFDRLRFKAVAWLLLWSALVLLVFPLAAHSVWTIFPAVFAV----GT 316
           G+G  +GN+ GG   DR   + +  ++  S L+L++    A   W + PA  A+      
Sbjct: 247 GVGLTLGNMWGGKAADRSIDRTL--IVSLSVLILVLLAFTALMRWPL-PAAVAILIWGIA 303

Query: 317 MVSLSPALQTHLMDVAADAQTLAAASNHAAFNVANALGPWLGGLAITAGFGWTSTGYIGA 376
             +L P LQ  +M+ A DA  LA+A N  AFN+ NA+G  LGG  I AG G+ +    GA
Sbjct: 304 SFALVPPLQMRVMEAAKDAPNLASAVNIGAFNLGNAIGAALGGAVINAGLGYPAISLAGA 363

Query: 377 ATA-VGGLLVFAWAWKIERA 395
           A A +G L+V A+AW+   A
Sbjct: 364 AMAGLGLLMVLAFAWRSRAA 383