Pairwise Alignments

Query, 279 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 189 a.a., L-rhamnose operon transcriptional activator RhaR from Pseudomonas fluorescens FW300-N2E2

 Score = 90.1 bits (222), Expect = 3e-23
 Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 6/192 (3%)

Query: 88  YLMFYVDARWLGALQHELGVSSDGHFIPYAPIQSLDQALFNGLTQLYA-TLRDPQADTLR 146
           Y M Y+D  W+  +  + G  +D H   +    +L QA     T L+   + +    +L 
Sbjct: 2   YRMLYIDPEWVNRMVFQ-GRFTDDHIHLFQT--ALSQAPDFARTFLHQHQIIEKSPSSLE 58

Query: 147 KQSAAVEYFTLLQQTLAPAPTQPHAEPLQQ-LSRAADYIAEHCTEALRLEDICQAAELSP 205
           +++  ++  T L +  + AP +P +   Q  + +    + +   + L LE++ Q   L P
Sbjct: 59  RETILLDLVTQLFER-SGAPIEPVSAAEQHAVQKIKRKLEDEFDKHLSLEELAQLVNLDP 117

Query: 206 SYLIRTFKQHYGMTPHAYLLNRRIQRSQHWLRQGLDLAEIALAAGFADQAHFQRTFKRQL 265
            YLIR FK+  G++PH+Y + +RI + Q  LR G  LAE +   GF DQ+H  R FK+ +
Sbjct: 118 LYLIRVFKKSVGVSPHSYQIQKRIAQVQKLLRTGSSLAEASFTCGFFDQSHMTRAFKKVV 177

Query: 266 AATPGQYRDRTA 277
             TPG +R+ +A
Sbjct: 178 GITPGSFRNSSA 189