Pairwise Alignments

Query, 279 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 281 a.a., FIG229276: Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

 Score =  125 bits (315), Expect = 8e-34
 Identities = 93/278 (33%), Positives = 134/278 (48%), Gaps = 15/278 (5%)

Query: 3   GSDDSQP-RFWRDAALP---FLEARAVADGRKVCYAPHCHETFSIGAITAGASTYFNGDA 58
           GSD  +   FW+ A L     L AR +       +APH H+ + IG I AGA  Y    A
Sbjct: 2   GSDQGESIHFWQTAPLAGVELLSARYIEHR----FAPHVHDGYVIGMIMAGAQRYRYRGA 57

Query: 59  QERIARGTLVLINPQTVHACNPIDGRPWSYLMFYVDARWLGALQHELGVSSDGHFIP-YA 117
           +     GTLVLINP  +H  +      W Y  FY D+  + +L  EL + +D   +P + 
Sbjct: 58  EHLAGSGTLVLINPDELHTGHKGTEDGWLYRAFYPDSGQILSLLDELELPTDT--LPAFG 115

Query: 118 PIQSLDQALFNGLTQLYATLRDPQADTLRKQSAAVEYFTLLQQTLAPAPT--QPHAEPLQ 175
                D  L  G  QL+  L  P    L++Q+A  E    L Q  A  PT  +P  E  +
Sbjct: 116 ATLYRDPDLVKGFCQLHCLLESPST-ALQQQTAWREMMLSLLQRHAAVPTASKPGKEH-R 173

Query: 176 QLSRAADYIAEHCTEALRLEDICQAAELSPSYLIRTFKQHYGMTPHAYLLNRRIQRSQHW 235
            ++ A + +         LE++  A  LSP +  R F++  GM PH +L+ +RI R++  
Sbjct: 174 AVTLAKELLQSRLAAPPSLEELAAAVNLSPFHFARVFRRATGMPPHTWLMQQRIARARAL 233

Query: 236 LRQGLDLAEIALAAGFADQAHFQRTFKRQLAATPGQYR 273
           L++G    E+A   GFADQ+H  R FK+     PG YR
Sbjct: 234 LQRGCLPLEVATQLGFADQSHLSRQFKQVYGVGPGAYR 271