Pairwise Alignments

Query, 279 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  115 bits (289), Expect = 8e-31
 Identities = 67/242 (27%), Positives = 119/242 (49%), Gaps = 5/242 (2%)

Query: 33  YAPHCHETFSIGAITAGASTYFNGDAQERIARGTLVLINPQTVHACNPIDGRPWSYLMFY 92
           ++ H HE +++G I  GA +++         + +++L+N   VH  +      W+Y   Y
Sbjct: 36  FSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDSIILVNADEVHTGHSAVEGGWAYKAMY 95

Query: 93  VDARWLGALQHELGVSSDGHFIPYAPIQSLDQALFNGLTQLYATLRDPQADTLRKQSAAV 152
                   +  E+G ++   + P A +   D  L + L  ++ TL       LR+     
Sbjct: 96  PLPEQFATVAKEIGANTGAPYFPQAVVY--DPELASQLRLVFETLEKSTNRLLRETLIYA 153

Query: 153 EYFTLLQQ--TLAPAPTQPHAEPLQQLSRAADYIAEHCTEALRLEDICQAAELSPSYLIR 210
               L+ +    AP   QP    L+ L    +++ +     + LE++ Q A LSP +L+R
Sbjct: 154 SLVKLMTRHGRTAPQADQP-LSALRPLLLVKEFLDDFPQADVSLEELAQLAGLSPFHLVR 212

Query: 211 TFKQHYGMTPHAYLLNRRIQRSQHWLRQGLDLAEIALAAGFADQAHFQRTFKRQLAATPG 270
           TF++ +G+ PHAY +  R++ ++  L+QG+ ++E A   GF DQ+H  R FK+ L  TP 
Sbjct: 213 TFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFHDQSHLHRHFKKALGITPK 272

Query: 271 QY 272
           QY
Sbjct: 273 QY 274