Pairwise Alignments

Query, 279 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 279 a.a., AraC family transcriptional regulator from Rahnella sp. WP5

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 71/248 (28%), Positives = 110/248 (44%), Gaps = 12/248 (4%)

Query: 33  YAPHCHETFSIGAITAGASTYFNGDAQERIARGTLVLINPQTVHACNPIDGRPWSYLMFY 92
           Y PH H+++ +G    G   +     + +   G + ++ P  +H  + +    ++Y M Y
Sbjct: 29  YDPHWHDSYLVGVTQYGLQQFSCRRQKHQSLPGKVFMLEPGEIHDGDAVQPGGFTYHMLY 88

Query: 93  VDARWLGALQHELGVSSDGHFIPYAPIQSLDQALFNGLTQLYATLRDPQA---DTLR--K 147
           +D +WL     EL    D   +  A   S +  L        AT R  QA     LR  +
Sbjct: 89  LDPQWLS---RELAARRDS--LSPAGDPSFENTLAQDPQLAQATSRAFQALHGKDLRIVR 143

Query: 148 QSAAVEYFTLL--QQTLAPAPTQPHAEPLQQLSRAADYIAEHCTEALRLEDICQAAELSP 205
           Q+A       L    T  P   Q HA   +   +A +Y+  H  E + LE +  A   S 
Sbjct: 144 QTALDGLLCALGGHLTWQPPRLQGHAPWSRVAHQAREYLHAHLHEDIGLEQLAAATGESR 203

Query: 206 SYLIRTFKQHYGMTPHAYLLNRRIQRSQHWLRQGLDLAEIALAAGFADQAHFQRTFKRQL 265
             + R FK  +G+ PHAYL+  ++ R++  L  G   A++A   GFADQ+H  R F+R  
Sbjct: 204 FVVSRAFKAEFGLPPHAYLIQLKLTRAREGLALGRTPADVAADLGFADQSHLGRWFRRAY 263

Query: 266 AATPGQYR 273
             TP  YR
Sbjct: 264 QLTPAHYR 271