Pairwise Alignments

Query, 279 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 312 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  125 bits (313), Expect = 2e-33
 Identities = 72/241 (29%), Positives = 114/241 (47%), Gaps = 3/241 (1%)

Query: 33  YAPHCHETFSIGAITAGASTYFNGDAQERIARGTLVLINPQTVHACNPIDGRPWSYLMFY 92
           ++ H HE +++G I  GA  ++         + +++L+N   VH         WSY   Y
Sbjct: 63  FSRHSHEGYTVGVIETGAQRFYRTGGDHTAPQHSIILVNADEVHNGRSATDFGWSYRAMY 122

Query: 93  VDARWLGALQHELG-VSSDGHFIPYAPIQSLDQALFNGLTQLYATLRDPQADTLRKQSAA 151
              +    +  ELG  + D  + P   +   D+ L   L   + TL       LR+    
Sbjct: 123 PLPQQFARVHDELGGKAGDAPYFPEPVVH--DKPLAELLRLTFDTLSSSDNALLRESLIY 180

Query: 152 VEYFTLLQQTLAPAPTQPHAEPLQQLSRAADYIAEHCTEALRLEDICQAAELSPSYLIRT 211
                L+    A  P +    P   L+    ++ +  T  + L+ + + A LSP YLI+ 
Sbjct: 181 TSLARLMSHHGASRPVEKSLRPTAHLALVKQFLDDMPTADVSLDALAKLAGLSPFYLIKQ 240

Query: 212 FKQHYGMTPHAYLLNRRIQRSQHWLRQGLDLAEIALAAGFADQAHFQRTFKRQLAATPGQ 271
           F++ YG+ PHAY +  RI+ ++  +RQG  L E+ALA GF DQ+H  R FKR +  TPGQ
Sbjct: 241 FQRQYGLPPHAYQIQGRIRLAKQMIRQGCKLLEVALACGFHDQSHLNRHFKRAMGVTPGQ 300

Query: 272 Y 272
           Y
Sbjct: 301 Y 301