Pairwise Alignments

Query, 279 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 276 a.a., transcriptional regulator, AraC family from Paraburkholderia bryophila 376MFSha3.1

 Score =  103 bits (258), Expect = 3e-27
 Identities = 80/271 (29%), Positives = 131/271 (48%), Gaps = 15/271 (5%)

Query: 10  RFWRDAALPFLEARAVADGRKVCYAPHCHETFSIGAITAGASTYFNGDAQERIARGTLVL 69
           R+WR   LP  +    A+     +APH H+ ++I  I AGA  Y    +      G + +
Sbjct: 12  RYWRTPLLPGADL-LTAEYHDHEFAPHWHDAYTIPVIVAGAEGYRYRGSDYVAEAGGVPI 70

Query: 70  INPQTVHACNPIDGRPWSYLMFYVDARWLGALQHELGVSSDGHFIP---YAPIQSLDQAL 126
           INP  +H  +      W Y + Y   +++    HEL     G   P   +AP    D  L
Sbjct: 71  INPGELHTGSKAVEAGWRYRVTYAPVQFI----HELTDQIAGKPQPLPWFAPGVIHDPDL 126

Query: 127 FNGLTQLYATLRDPQADTLRKQSAAVEYFTLL----QQTLAPAPTQPHAEPLQQLSRAAD 182
              L   +  L +  +D L  ++A ++  + L     QTL P P++  A+  + ++   +
Sbjct: 127 AVRLANAHRML-EAGSDALAAEAAMLDALSTLLVRYSQTL-PEPSRMAADDTR-VAVMKE 183

Query: 183 YIAEHCTEALRLEDICQAAELSPSYLIRTFKQHYGMTPHAYLLNRRIQRSQHWLRQGLDL 242
            +A    E + L D+ QAA LSP +  R F +  G+ PHA+    R+QR+   LR G+ +
Sbjct: 184 RLAGDLLEPVTLADVAQAAGLSPFHAARLFNRATGLPPHAWRNQIRLQRALAPLRAGVAV 243

Query: 243 AEIALAAGFADQAHFQRTFKRQLAATPGQYR 273
            ++A A+GF DQ+HF R F+R     PG+++
Sbjct: 244 TDVAAASGFTDQSHFTRHFRRMFGVPPGRWQ 274