Pairwise Alignments

Query, 1360 a.a., ATP-dependent helicase HrpA from Pseudomonas stutzeri RCH2

Subject, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

 Score =  262 bits (670), Expect = 9e-74
 Identities = 166/480 (34%), Positives = 258/480 (53%), Gaps = 29/480 (6%)

Query: 72  LPIAAKRDEIKAALEKHQVLVIAGETGSGKTTQLPKICLEIGRGVHGLIGHTQPRRLAAR 131
           LPI     ++ + +     L++    G+GK+T  P   L+ G G HG I   +PRRLAAR
Sbjct: 4   LPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAG-GFHGKIIMLEPRRLAAR 62

Query: 132 SVATRVAEEIGTPLGELVGYQVRFEDQSKDSSLIKLMTDGILLAETQHDRFLERYDTIIV 191
           ++A  +A+++G  +G+ VGY+VR E++   ++ ++++T+GI+    Q+D  L+  D +I 
Sbjct: 63  NIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLIF 122

Query: 192 DEAHERSLNIDFLLGF-LKTLLPRRPDLKVIITSATIDLQRFSEHFDGAPIVEVSGRTYP 250
           DE HERS++ D  L   L+     R DLK+++ SAT+D Q        A  VE  GR +P
Sbjct: 123 DEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRGFP 182

Query: 251 VETWYRPLAAEIDEDGNRVEDDLTVDQGILAALDEITAHEQSVGKRPGDVLVFLPGEREI 310
           +E  Y+PL +               D+ ++ A+     H   +    G +L FLPG   I
Sbjct: 183 IEIRYQPLRS---------------DEPLVTAMQRQIRH--LLQHETGSLLAFLPGAASI 225

Query: 311 RDAAEVLRKANLKFTEVLPLYARLTPAEQQKIFQPRPG--RKIVLATNVAETSLTVPGIR 368
               E L     +  E+ PLY ++  A QQ+   P     RK+VLATN+AETSLT+ GIR
Sbjct: 226 NQLTEQLSDLASE-VEICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIR 284

Query: 369 YVIDSGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGICIRLYSEEDFLGRP 428
            V+DSG  R +R+  +  + RL    ++Q+SA QR GR GR+EPGIC+RLYSE     +P
Sbjct: 285 IVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQP 344

Query: 429 EFTDPEILRTNLAAVILQMLHLRLGDIQDFPFIEPPDGKAISDGFNLLQELSAVNRENQL 488
              +PE+L T+LA + L++         D  ++  P   A +    LLQ L  ++   Q+
Sbjct: 345 WVPEPEMLHTDLAPLALELAQWG-AQPSDLAWLNLPPSSAFAQAQQLLQRLGLLDARTQI 403

Query: 489 TPMGRQLARLPIDPRLGRMLLEAAQQGSLAEVLIVASALSVQDVRERPADRQQAADQAHA 548
           T  G++   L ++PR+  MLL A + G  A    + SAL++  + E P   +Q  D  H+
Sbjct: 404 TAAGKEAHLLGVEPRIAAMLLSADRLGESA----LQSALALTVLLEEP--ERQVIDVQHS 457