Pairwise Alignments

Query, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 544 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  282 bits (722), Expect = 2e-80
 Identities = 182/537 (33%), Positives = 281/537 (52%), Gaps = 15/537 (2%)

Query: 29  VSVVQLKDLADQQEAQTRASLIRDRRAELKHYVELAKNAIGPIYERSAEGDMQ---ARSQ 85
           V++V L  L      Q    L + +  + +H V+ A   +   +     G +    A+ Q
Sbjct: 19  VAIVMLFTLGAFMLKQIHTDLYQAKVQKTQHVVQTASGVLSYYHGLETAGTLTREAAQKQ 78

Query: 86  AVAIFERLSYGSEGYFWGYDGQSRRVFQGATRERIGESFADYRDPNGVFAIRELVK-AGQ 144
           A++    L Y    YFW  D     V      +  G++ +  RDPNG     E+V  A  
Sbjct: 79  ALSAVRGLRYDQSDYFWINDLTPVMVMHPTNPKLEGQNLSAIRDPNGFALFNEMVAIAKA 138

Query: 145 DSSHYVDYSFAVPGSNALVPKVGYAEYLPKWNLVFGTSLNLDDVERDVVEARAVFQARID 204
             +  +DY +  PG+ A V K  Y +    W  + G+ + +DDV+ +       F++++ 
Sbjct: 139 KGAGIIDYLWPKPGAEAPVGKTSYVKLFEPWGWIIGSGVYVDDVQTE-------FRSQLI 191

Query: 205 SLTLIMLGSALLLLILMAGLAVLMSNAILRPLLQIKQNLDDMAQGDGDLTHRLPITSRDE 264
             +LI     L + ++M  L  L+  +I+RPL +    + ++A G+ DLT  L    +DE
Sbjct: 192 KASLI----GLAITLVMGLLLTLIVRSIVRPLQETVNAMANIASGESDLTRTLDTHGQDE 247

Query: 265 LGELSTSFNRFVEKIHALVRQVAGTTTQLSGLVGAVASQAQRSEQAMADQRSETDQVATA 324
           + +L+  FN F  K+  +V Q+  + + L      + + A ++++    Q  + + VATA
Sbjct: 248 VTQLARHFNAFTAKLRQVVSQLQESASALGQSSSELGNDAAQAQERSQQQSQQMELVATA 307

Query: 325 INEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIHELVGELRGSGESLEGL 384
           INE++    +VA +A+ AA   R+ + Q    +  +D S++QI  L   +  + E +  L
Sbjct: 308 INEVTYGVQDVAKNAEHAASEMRDAESQAQQGQVNIDGSLQQIDRLSQTIDQAVEVIRTL 367

Query: 385 QQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQST 444
             +   I  VL+VIR+IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ+ST
Sbjct: 368 ASESTQIGSVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQKST 427

Query: 445 GEIQGMIDRLQNATSHTVGTMLRAGEKGESTRNHANQAGESLDAISALIGTINSMNAQIA 504
            EIQ MI+RLQ  +   V  +  +    + T   A  AG SL+AI   +  +NS+NA IA
Sbjct: 428 AEIQAMIERLQTHSEAAVKVIGDSSRASQLTIEQAGLAGASLNAIGQALRNLNSLNASIA 487

Query: 505 AAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTARELNGLAEQLQRLVGQFRI 561
           +A  +Q  V E+IN++V   A      A  A Q +Q +  L  L+EQL  L+ QFR+
Sbjct: 488 SATLQQAHVVEDINQNVTQAAGLSHSTAMAAEQSSQASSRLKALSEQLNGLLKQFRV 544