Pairwise Alignments

Query, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 559 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  626 bits (1614), Expect = 0.0
 Identities = 330/557 (59%), Positives = 425/557 (76%)

Query: 5   LRLRAKLLLLALGPILLLAVVLSGVSVVQLKDLADQQEAQTRASLIRDRRAELKHYVELA 64
           L L+AK+L LA+ P+LL AV++S  +   LK+ A ++  QTR  L+ + +A L++YV + 
Sbjct: 3   LSLKAKVLSLAILPVLLSAVIISLTTAFILKEQASKEVQQTRERLLSEAKATLQNYVAVG 62

Query: 65  KNAIGPIYERSAEGDMQARSQAVAIFERLSYGSEGYFWGYDGQSRRVFQGATRERIGESF 124
             AI P+Y+ +A GD +AR+QA+ +   +SYG +GYF+GYD ++ R+F+  + + +G+SF
Sbjct: 63  LTAIKPLYDAAAPGDNEARAQAIKLLSNISYGKDGYFFGYDSETIRLFKANSPDGVGKSF 122

Query: 125 ADYRDPNGVFAIRELVKAGQDSSHYVDYSFAVPGSNALVPKVGYAEYLPKWNLVFGTSLN 184
            D RDPNGV+  R+LVK  +D +HY++YS  +PGSN LVPK+GY EYLPKW+L  G+S+N
Sbjct: 123 KDNRDPNGVYVNRDLVKVAKDGTHYLEYSSPLPGSNDLVPKLGYTEYLPKWDLAVGSSVN 182

Query: 185 LDDVERDVVEARAVFQARIDSLTLIMLGSALLLLILMAGLAVLMSNAILRPLLQIKQNLD 244
           LD +E  V    A    R+  + L ++G A ++L+++A + ++++N ILRPL  +K NLD
Sbjct: 183 LDGIEAQVALVEAKVHDRLQGVILSIVGIAAVVLLVIAVVGLVLANTILRPLHLMKDNLD 242

Query: 245 DMAQGDGDLTHRLPITSRDELGELSTSFNRFVEKIHALVRQVAGTTTQLSGLVGAVASQA 304
           D+A G+GDLT RL ITS+DELG+L+ SFNRFV+KIH LVRQ+   T+QL+GLV  V+ QA
Sbjct: 243 DIAAGEGDLTRRLTITSQDELGQLAGSFNRFVDKIHGLVRQITDMTSQLTGLVTQVSEQA 302

Query: 305 QRSEQAMADQRSETDQVATAINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSI 364
           QRSEQAM  QR ETDQVATAINEMS+AA EVA SAQ AA AA++TD++G +AK+VV  SI
Sbjct: 303 QRSEQAMERQRHETDQVATAINEMSSAAQEVARSAQGAAVAAQQTDEEGQSAKRVVAGSI 362

Query: 365 RQIHELVGELRGSGESLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGR 424
           +QIH LV ++R SG SL+ LQQDV  IV VL VIR+IAEQTNLLALNAAIEAARAGEAGR
Sbjct: 363 QQIHALVNDIRSSGVSLDSLQQDVASIVSVLGVIRSIAEQTNLLALNAAIEAARAGEAGR 422

Query: 425 GFAVVADEVRALASRTQQSTGEIQGMIDRLQNATSHTVGTMLRAGEKGESTRNHANQAGE 484
           GFAVVADEVRALASRTQQST EIQGMIDRLQ+ T   V  M R+ E G+ T   AN+AG 
Sbjct: 423 GFAVVADEVRALASRTQQSTQEIQGMIDRLQSGTHAAVEAMRRSSEAGDGTSERANEAGA 482

Query: 485 SLDAISALIGTINSMNAQIAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTARE 544
           SLD ++ LIGTINSMNAQIA+AAEEQTAVAEEINRSVH IA AVD VA +   GAQT+R 
Sbjct: 483 SLDTMAQLIGTINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRS 542

Query: 545 LNGLAEQLQRLVGQFRI 561
           L  L ++L +LVGQFRI
Sbjct: 543 LADLGQRLGKLVGQFRI 559