Pairwise Alignments

Query, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 712 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  278 bits (711), Expect = 5e-79
 Identities = 179/446 (40%), Positives = 252/446 (56%), Gaps = 13/446 (2%)

Query: 119 RIGESFADYRDPNGVFAIRELVKAGQDSSHY-VDYSFAVPGSNALVPKVGYAEYLPKWNL 177
           ++GE  +D  D +    +  L K G     Y +D      G   +    G  E   +W L
Sbjct: 277 KLGEKASDLLDAS---ELDNLAKLGVGEVRYDIDEEH---GHIEVYMPFGIGETNARWTL 330

Query: 178 VFGTSLNLDDVERDVVEARAVFQARIDSLTLIMLGSALLLLILMAGLAV--LMSNAILRP 235
           +    LN    +   ++     Q + D   + M+G    L+I   GL V  L+ + I RP
Sbjct: 331 MLQLPLNAVMADLQALQQDLDHQRQADIFGMAMVG----LVIAGIGLLVIWLVGHGIARP 386

Query: 236 LLQIKQNLDDMAQGDGDLTHRLPITSRDELGELSTSFNRFVEKIHALVRQVAGTTTQLSG 295
           L Q+   LDD+AQG+GDLT RL     DELG ++  FN F+ K+  ++ QV  +   +S 
Sbjct: 387 LKQMVAMLDDIAQGEGDLTRRLVSDRADELGAIARGFNTFLSKLQGMITQVVTSVQSVSD 446

Query: 296 LVGAVASQAQRSEQAMADQRSETDQVATAINEMSAAAHEVAMSAQRAAEAARETDQQGVA 355
                A  A R+ Q +  Q SE DQVATA++EM+A A +VA +A +AA+AA   DQ    
Sbjct: 447 SSEHTADIAIRTNQGVHKQMSEIDQVATAVHEMTATAQDVARNATQAAQAASHADQAASQ 506

Query: 356 AKQVVDQSIRQIHELVGELRGSGESLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIE 415
             Q+V  +   I  L  E+  +   ++ L +D + I  +L  IR IAEQTNLLALNAAIE
Sbjct: 507 GMQIVRDTSTSIGALAVEIGKAVGVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIE 566

Query: 416 AARAGEAGRGFAVVADEVRALASRTQQSTGEIQGMIDRLQNATSHTVGTMLRAGEKGEST 475
           AARAGE GRGFAVVADEVR LA +TQQ+T EIQ MI +LQ  T   V  M  +  + + +
Sbjct: 567 AARAGEQGRGFAVVADEVRNLAQKTQQATEEIQAMIQQLQQGTRDVVRVMEDSQHRTDES 626

Query: 476 RNHANQAGESLDAISALIGTINSMNAQIAAAAEEQTAVAEEINRSVHHIADAVDGVASDA 535
             HA +A ++L+ I+  +  IN MN QIA+AAEEQ+AVA++INR+V +I    + VAS A
Sbjct: 627 VQHAAKAAQALETITQAVSVINDMNTQIASAAEEQSAVADDINRNVINIGQVANEVASGA 686

Query: 536 AQGAQTARELNGLAEQLQRLVGQFRI 561
            + +  +  L  LAEQ +RL+ QFR+
Sbjct: 687 DESSAASAGLTKLAEQQRRLINQFRV 712