Pairwise Alignments

Query, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 713 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  277 bits (709), Expect = 9e-79
 Identities = 181/469 (38%), Positives = 259/469 (55%), Gaps = 11/469 (2%)

Query: 95  YGSEGYFWGYDGQSRRVFQGATRERIGESFADYRDPNGVFAIRELVKAGQDSSHYVDYSF 154
           Y   G      G  R V       + GE  +D  D   V  + +L +   + ++ VD + 
Sbjct: 254 YNGAGEMALIGGNQRLVAYTKDPSKFGEKVSDILDATQVANLGKLNRG--EVTYNVDKA- 310

Query: 155 AVPGSNALVPKVGYAEYLPKWNLVFGTSLNLDDVERDVVEARAVFQARIDSLTLIMLGSA 214
              G   L    G  +   +W L+    LN    +   ++     Q + D+  + M+G  
Sbjct: 311 --NGRIELYLPFGIGQTDARWTLLLQLPLNAVMADLQQLQGDLNTQRKADTFGMAMVG-- 366

Query: 215 LLLLILMAGLAV--LMSNAILRPLLQIKQNLDDMAQGDGDLTHRLPITSRDELGELSTSF 272
             L+I   GL V  L+ + I RPL Q+   LDD+AQG+GDLT RL     DELG ++  F
Sbjct: 367 --LVIAGLGLLVIWLVGHGIARPLKQMVAMLDDIAQGEGDLTRRLSSDRADELGSIAKGF 424

Query: 273 NRFVEKIHALVRQVAGTTTQLSGLVGAVASQAQRSEQAMADQRSETDQVATAINEMSAAA 332
           N F+ K+ A++ QV  +   +S      A  A R+   +  Q +E DQVATA+ EM+A A
Sbjct: 425 NTFLAKLQAMITQVVTSVQSVSDSSEHTADIAIRTNLGVHKQMAEIDQVATAVQEMTATA 484

Query: 333 HEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIHELVGELRGSGESLEGLQQDVKGIV 392
            +VA +A +AA+AA   DQ      Q+V  +   I  L  E+  +   ++ L +D + I 
Sbjct: 485 QDVARNATQAAQAASHADQAAAQGMQIVRDTSTSIGVLAVEIGKAVGVVQTLAKDSENIN 544

Query: 393 GVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTGEIQGMID 452
            +L  IR IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA +TQQ+T EIQ MI 
Sbjct: 545 AILIAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATEEIQSMIQ 604

Query: 453 RLQNATSHTVGTMLRAGEKGESTRNHANQAGESLDAISALIGTINSMNAQIAAAAEEQTA 512
           +LQ  T   V  M  +  K + +  HA +A ++L+ I+  +  IN MN QIA+AAEEQ+A
Sbjct: 605 QLQQGTRDVVRVMEDSQNKTDESVQHAAKAAQALETITQAVSVINDMNTQIASAAEEQSA 664

Query: 513 VAEEINRSVHHIADAVDGVASDAAQGAQTARELNGLAEQLQRLVGQFRI 561
           VA++INR+V +I    + VA  A + +  + +L  LAEQ +RL+ QF++
Sbjct: 665 VADDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 713