Pairwise Alignments

Query, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  241 bits (614), Expect = 7e-68
 Identities = 145/408 (35%), Positives = 231/408 (56%), Gaps = 15/408 (3%)

Query: 168 YAEYLPKWNLVFGTS--LNLDDVERDV------------VEARAVFQARIDSLTLIMLGS 213
           +AE +   N++F     +NL  + R +            ++  A+ QA  D L   +  +
Sbjct: 171 FAELMANGNVIFSDKHGVNLTPITRPINFAGQDWQLIGYIDLTAI-QANTDQLNWKITLA 229

Query: 214 ALLLLILMAGLAVLMSNAILRPLLQIKQNLDDMAQGDGDLTHRLPITSRDELGELSTSFN 273
            L+   ++   +V M +   +PL ++   + +++QG+GDLT RL + S+DE+G++  S N
Sbjct: 230 LLVCASVIIVASVTMLHVSFKPLSRLNTLVANLSQGNGDLTQRLAVESKDEIGQICNSIN 289

Query: 274 RFVEKIHALVRQVAGTTTQLSGLVGAVASQAQRSEQAMADQRSETDQVATAINEMSAAAH 333
            F+EK+  +   VA ++ ++   V  +++QA+ +   +     ET+Q  TAI EMSA+A 
Sbjct: 290 LFIEKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEMSASAG 349

Query: 334 EVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIHELVGELRGSGESLEGLQQDVKGIVG 393
            +A SA  AA     T++    +KQ V +++  ++ LV ++    E++  + +D K I  
Sbjct: 350 SIAQSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTKQINS 409

Query: 394 VLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTGEIQGMIDR 453
           VL VI AIAEQTNLLALNAAIEAARAGE GRGFAVVADEVRALASRTQQST +I  M+  
Sbjct: 410 VLQVIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQINDMLAT 469

Query: 454 LQNATSHTVGTMLRAGEKGESTRNHANQAGESLDAISALIGTINSMNAQIAAAAEEQTAV 513
           L+  T + V  M       E T    N   +SL+ ++  +  +N++N  IA +A EQ  V
Sbjct: 470 LKTTTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAMEQRQV 529

Query: 514 AEEINRSVHHIADAVDGVASDAAQGAQTARELNGLAEQLQRLVGQFRI 561
             E+++++  I + V  +  +AAQ    + EL   +  L  +VG+FR+
Sbjct: 530 THEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRFRV 577