Pairwise Alignments

Query, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  268 bits (686), Expect = 4e-76
 Identities = 153/353 (43%), Positives = 226/353 (64%), Gaps = 2/353 (0%)

Query: 209 IMLGSALLLLILMAGLAVLMSNAILRPLLQIKQNLDDMAQGDGDLTHRLPITSRDELGEL 268
           + +G  +L+++L    AV+++  I RPL      ++ +A GD  LTH   +T RDELG L
Sbjct: 290 LQIGCVVLVMLLGILAAVIITRQITRPLRDTLAIVERIASGD--LTHTEAVTRRDELGVL 347

Query: 269 STSFNRFVEKIHALVRQVAGTTTQLSGLVGAVASQAQRSEQAMADQRSETDQVATAINEM 328
                R    +  L+  +    TQ++     +++  +++   +  Q+ ETDQVATA++EM
Sbjct: 348 QQGIQRMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEM 407

Query: 329 SAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIHELVGELRGSGESLEGLQQDV 388
           SA  HEVA +A++A+ AA + DQQ     +VV ++I+QI  L  E+  S +++  L+QD 
Sbjct: 408 SATVHEVARNAEQASVAASDADQQARDGDKVVGEAIQQIERLAAEVVRSSDAMNVLEQDS 467

Query: 389 KGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTGEIQ 448
             I  V+DVI+A+AEQTNLLALNAAIEAARAGEAGRGFAVVADEVR LA RTQQST EI+
Sbjct: 468 DKIGKVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQQSTEEIE 527

Query: 449 GMIDRLQNATSHTVGTMLRAGEKGESTRNHANQAGESLDAISALIGTINSMNAQIAAAAE 508
           G++  LQN T    G ML +    +S+     +AG SL++I+  + +I +MN QIAAAAE
Sbjct: 528 GLVAALQNGTRQVSGIMLGSRTLTDSSVELTRRAGTSLESITRTVSSIQAMNQQIAAAAE 587

Query: 509 EQTAVAEEINRSVHHIADAVDGVASDAAQGAQTARELNGLAEQLQRLVGQFRI 561
           +Q++VA+EI+RS+ ++ D  +  A  + + A ++ EL  L  QLQ +V  FR+
Sbjct: 588 QQSSVADEISRSIVNVRDVSEQTAEASEETAASSVELARLGGQLQMMVSHFRV 640