Pairwise Alignments

Query, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 642 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  252 bits (643), Expect = 4e-71
 Identities = 153/358 (42%), Positives = 217/358 (60%), Gaps = 2/358 (0%)

Query: 204 DSLTLIMLGSALLLLILMAGLAVLMSNAILRPLLQIKQNLDDMAQGDGDLTHRLPITSRD 263
           DS    +L  A+++L+L    A+L++  I RPL         +A  DGDLT+ L  T +D
Sbjct: 287 DSAVTQLLTVAVIVLLLGIFAAILITRQITRPLDSTVIAARRIA--DGDLTNDLSTTRQD 344

Query: 264 ELGELSTSFNRFVEKIHALVRQVAGTTTQLSGLVGAVASQAQRSEQAMADQRSETDQVAT 323
           ELG L  +       +  L+  ++   TQ++     +++ ++++   +  Q+ E DQVAT
Sbjct: 345 ELGLLQNTMQHMTVSLRTLIGGISNGVTQIATAAEELSAVSEQTSAGVTQQKLEVDQVAT 404

Query: 324 AINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIHELVGELRGSGESLEG 383
           A+N+M++   EVA + + A++AAR+   +      VV  + R+I +L GE+   GE+++ 
Sbjct: 405 AMNQMASTVQEVAQNTEDASQAARQASDRAAHGSSVVQHATREISQLAGEVGQLGEAMQR 464

Query: 384 LQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQS 443
           L QD   I GV+DVI+A+AEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ S
Sbjct: 465 LIQDSDKIGGVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQSS 524

Query: 444 TGEIQGMIDRLQNATSHTVGTMLRAGEKGESTRNHANQAGESLDAISALIGTINSMNAQI 503
           T EI+ +I  LQ+ T      M  + ++ E T   A QA ESL  I+  I TI  M+ QI
Sbjct: 525 TTEIEALIKSLQDGTGAASELMNASRQRTEGTVALARQAEESLLEITHSIVTIEQMSQQI 584

Query: 504 AAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTARELNGLAEQLQRLVGQFRI 561
           +AAAEEQ+AV +EINRSV  + D  D  A+   Q A +  EL  L   LQ +V +FRI
Sbjct: 585 SAAAEEQSAVTDEINRSVISVRDIADQSATATEQSAASTVELARLGSNLQDMVARFRI 642