Pairwise Alignments

Query, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 619 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  246 bits (629), Expect = 1e-69
 Identities = 155/359 (43%), Positives = 224/359 (62%), Gaps = 13/359 (3%)

Query: 209 IMLGSALLLLILMAGLAV-LMSNAILRPLLQIKQNLDDMAQGDGDLTHRLPITSRDELGE 267
           ++L   L+  ++M+ LA  +++N I+ PL    +  + +A  DGDLTH   +T +DELG+
Sbjct: 268 MLLSVWLIAALIMSALAAWVITNLIVGPLRDTLKLAERVA--DGDLTHNQVVTRKDELGQ 325

Query: 268 LSTSFNRFVEKIHALVRQVAGTTTQLSGLVGAVASQAQRSEQAMADQRSETDQVATAINE 327
           L  S  R    +  L+  +    TQ++     +++  +++   +  Q++ETDQVATA++E
Sbjct: 326 LQGSMMRMTGNLRELIGGLRDGVTQIASAAEQLSAVTEQTSAGVNSQKNETDQVATAMHE 385

Query: 328 MSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIHELVGELRGSGESLEGLQQD 387
           MSA   EVA +A++A+ AA    ++      VV +++ QI +L  E+  S  +++ L+ +
Sbjct: 386 MSATVQEVARNAEQASHAAVNASKEAREGDGVVSKAVAQIEKLATEVTHSKSAMDDLKNE 445

Query: 388 VKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTGEI 447
              I GVLDVI+A+AEQTNLLALNAAIEAARAGEAGRGFAVVADEVR+LA RTQ ST EI
Sbjct: 446 SNKIGGVLDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQTSTEEI 505

Query: 448 QGMIDRLQNATSHTVGTML-----RAGEKGESTRNHANQAGESLDAISALIGTINSMNAQ 502
             +I  L   T+  V T+L           E TRN    AG S++ ++  I TI +MN Q
Sbjct: 506 AALISGLHTRTAQ-VATILDNSQALTANSVELTRN----AGVSINNMTQAISTIETMNHQ 560

Query: 503 IAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTARELNGLAEQLQRLVGQFRI 561
           IAAAAEEQ+AVAEEINRSV ++ D  +  AS + + A ++ EL  L   LQ LV +FR+
Sbjct: 561 IAAAAEEQSAVAEEINRSVLNVRDISEQTASASEETAASSVELARLGVHLQSLVSRFRV 619