Pairwise Alignments

Query, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 629 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  261 bits (666), Expect = 8e-74
 Identities = 153/360 (42%), Positives = 218/360 (60%), Gaps = 5/360 (1%)

Query: 202 RIDSLTLIMLGSALLLLILMAGLAVLMSNAILRPLLQIKQNLDDMAQGDGDLTHRLPITS 261
           R  ++T +++   ++++IL+ GL +     +++PL Q+ + + D+A G+GDLT RL ITS
Sbjct: 275 RASAITAMVV--VVVVIILLLGLLI---RVLMQPLHQMGRAMRDIADGEGDLTKRLAITS 329

Query: 262 RDELGELSTSFNRFVEKIHALVRQVAGTTTQLSGLVGAVASQAQRSEQAMADQRSETDQV 321
           +DE GEL+ SFNRFVE+IH  +R+VA T  QL  +   V   +  S      Q + T+ V
Sbjct: 330 QDEFGELAESFNRFVERIHTSIREVASTAAQLGEVATRVVKVSNASMGNSDQQANRTESV 389

Query: 322 ATAINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIHELVGELRGSGESL 381
           A AINE+ AAA E+A +A R ++ + +        + VV Q+I+ ++EL G++  S  ++
Sbjct: 390 AAAINELGAAAQEIAQNAARTSQQSSDASGLASDGQNVVQQTIKAMNELSGKISESCVNI 449

Query: 382 EGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQ 441
           E L      I  +L+VI +I++QTNLLALNAAIEAARAGEAGRGFAVVADEVR LA RTQ
Sbjct: 450 ESLNGKTANIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQ 509

Query: 442 QSTGEIQGMIDRLQNATSHTVGTMLRAGEKGESTRNHANQAGESLDAISALIGTINSMNA 501
            S  ++Q MI+ LQ      V  M  +  + E +   AN AGE L +++  I  IN MN 
Sbjct: 510 DSAQQVQTMIEELQVGARDAVTNMTESQRQSEDSVGIANLAGERLGSVTRRIEEINGMNQ 569

Query: 502 QIAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTARELNGLAEQLQRLVGQFRI 561
            +AAA EEQT+V E IN  + HI         +  Q  +    L   A +LQ+LVG FRI
Sbjct: 570 SVAAATEEQTSVVESINVDITHINTLNQLGVDNLRQTLEACNSLEEQAARLQQLVGSFRI 629