Pairwise Alignments

Query, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 543 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  287 bits (735), Expect = 6e-82
 Identities = 188/561 (33%), Positives = 295/561 (52%), Gaps = 21/561 (3%)

Query: 2   LSSLRLRAKLLLLALGPILLLAVVLSGVSVVQLKDLADQQEAQTRASLIRDRRAELKHYV 61
           + SL +  +L L+ +  +L+L  VLS   + QL +   Q +A+    +++     L  Y 
Sbjct: 3   MRSLSISRRLWLILVVSVLML-FVLSATLLRQLHNDLYQAKAEKTMHVVQTASGILSFYQ 61

Query: 62  ELAKNAIGPIYERSAEGDMQARSQAVAIFERLSYGSEGYFWGYDGQSRRVFQGATRERIG 121
            L   A G +   +A+       QA+   + L Y    YFW  D +   +      +  G
Sbjct: 62  GL--EAAGGMTREAAQ------QQALKEIKSLRYSQSDYFWINDLRPVMIMHPTNAKLEG 113

Query: 122 ESFADYRDPNGVFAIRELVKAGQ-DSSHYVDYSFAVPGSNALVPKVGYAEYLPKWNLVFG 180
           +  +  +DP+G     E+V   +   +  V+Y +  PG++  V K  Y +    W  + G
Sbjct: 114 QDLSTIKDPDGFAVFNEMVTLVKAQGAGMVNYRWPKPGASEPVKKTSYVQLFQPWGWILG 173

Query: 181 TSLNLDDVERDVVEARAVFQARIDSLTLIMLGSALLLLILMAGLAVLMSNAILRPLLQIK 240
           + + +DDV        A F+ ++ +  + + G  L++++L+    V +  +I+RPL    
Sbjct: 174 SGVYVDDVA-------AEFKTQLWNAGMFIAGIVLIMVLLL----VTIVRSIVRPLRAAV 222

Query: 241 QNLDDMAQGDGDLTHRLPITSRDELGELSTSFNRFVEKIHALVRQVAGTTTQLSGLVGAV 300
             +  +A G+ DLT  L     DE+ EL T FN FV K+  +V Q+  +   L      +
Sbjct: 223 GAMASIASGESDLTRTLETHGNDEITELGTHFNAFVAKLRNVVGQLQHSAVALGQASTDL 282

Query: 301 ASQAQRSEQAMADQRSETDQVATAINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVV 360
            S A++++     Q  + D VATA+NE++    +VA +A+ AA   R+ + Q    +  +
Sbjct: 283 GSDAEQAQSRSEQQSQQMDLVATAVNEVTYGVQDVAKNAEHAASEMRDAESQAQQGQINI 342

Query: 361 DQSIRQIHELVGELRGSGESLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAG 420
           D S+RQI  L   +  + + ++ L  +   I  VL+VI +IAEQTNLLALNAAIEAARAG
Sbjct: 343 DNSLRQIEHLSSTIGQAVQVMQSLASESTQIGSVLEVISSIAEQTNLLALNAAIEAARAG 402

Query: 421 EAGRGFAVVADEVRALASRTQQSTGEIQGMIDRLQNATSHTVGTMLRAGEKGESTRNHAN 480
           E GRGFAVVADEVR LA RTQ+ST EIQ MI+RLQ  +   V  +  +    + T   AN
Sbjct: 403 EQGRGFAVVADEVRLLAQRTQKSTAEIQSMIERLQKHSDAAVKVIGDSSRSSQLTIEQAN 462

Query: 481 QAGESLDAISALIGTINSMNAQIAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQ 540
           QAG+SL +IS  +  +NS+NA IA+A  +QT V ++IN++V   A      A  A Q   
Sbjct: 463 QAGQSLTSISQALRNLNSLNASIASATLQQTHVVDDINQNVTQAAQLSQSTALAAEQSTS 522

Query: 541 TARELNGLAEQLQRLVGQFRI 561
            +  L GL+E+L  L+ QFR+
Sbjct: 523 ASLHLRGLSEELNTLLKQFRV 543