Pairwise Alignments

Query, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  257 bits (656), Expect = 1e-72
 Identities = 157/362 (43%), Positives = 225/362 (62%), Gaps = 7/362 (1%)

Query: 200 QARIDSLTLIMLGSALLLLILMAGLAVLMSNAILRPLLQIKQNLDDMAQGDGDLTHRLPI 259
           QAR   +T       LL +IL    AV+++  I RPL +    +D +A GD  LT  L +
Sbjct: 286 QARTTQITC-----TLLAIILGIIAAVIITRQITRPLRETLAVVDRIASGD--LTQTLAV 338

Query: 260 TSRDELGELSTSFNRFVEKIHALVRQVAGTTTQLSGLVGAVASQAQRSEQAMADQRSETD 319
           T  DELG L     R    +  L+  +  +  Q++     +++  +++   +  Q+ ETD
Sbjct: 339 TRSDELGVLQQGIQRMGTTLRELIGGIRDSVVQIASAAEELSAVTEQTSAGVNSQKVETD 398

Query: 320 QVATAINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIHELVGELRGSGE 379
           QVATA++EMSA   EVA +A++A++AA   D++     +VV ++I QI  L  E+  S +
Sbjct: 399 QVATAMHEMSATVAEVARNAEQASQAASNADREARDGDKVVGEAIAQIERLANEVGRSVD 458

Query: 380 SLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASR 439
           ++  L+Q+   I  V+DVI+A+AEQTNLLALNAAIEAARAGEAGRGFAVVADEVR LA R
Sbjct: 459 AMTELEQESDKIGKVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQR 518

Query: 440 TQQSTGEIQGMIDRLQNATSHTVGTMLRAGEKGESTRNHANQAGESLDAISALIGTINSM 499
           TQQST EI+ ++  LQ+ T      ML + E   S+   + QAG SL +I+  + +I +M
Sbjct: 519 TQQSTVEIETLVAALQSGTRQVSSIMLNSRELTVSSVTLSRQAGTSLGSITQTVSSIQAM 578

Query: 500 NAQIAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTARELNGLAEQLQRLVGQF 559
           N QIAAAAEEQ+AVAEEI+RS+ ++ D  +  AS + + A ++ EL  L  QLQ +V +F
Sbjct: 579 NQQIAAAAEEQSAVAEEISRSIVNVRDVSEQTASASEETAASSVELARLGGQLQTMVSRF 638

Query: 560 RI 561
           RI
Sbjct: 639 RI 640