Pairwise Alignments

Query, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 495 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  263 bits (672), Expect = 1e-74
 Identities = 147/360 (40%), Positives = 232/360 (64%), Gaps = 4/360 (1%)

Query: 206 LTLIMLGSALLLLILMAG----LAVLMSNAILRPLLQIKQNLDDMAQGDGDLTHRLPITS 261
           L+ ++LG  L  L+++AG    + +++   ++ PL ++   L+++A GDGDL+HRLP+ S
Sbjct: 136 LSDLLLGYFLQALLILAGSLLVIFIILKRLVISPLDKVVAALEEIANGDGDLSHRLPVES 195

Query: 262 RDELGELSTSFNRFVEKIHALVRQVAGTTTQLSGLVGAVASQAQRSEQAMADQRSETDQV 321
            DE+G+L+ +FN FVE+IH  + +V  T+  L G   A+ + +Q + Q +  Q  ET+  
Sbjct: 196 EDEIGKLANAFNGFVEQIHGTITRVHETSGLLLGDAKALGTLSQSNNQRVQAQLKETEAA 255

Query: 322 ATAINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIHELVGELRGSGESL 381
            TA+ ++SA+A+EVA++A+R A+AA + D+     ++  D  +    +L GEL  S +S+
Sbjct: 256 VTAVTQLSASANEVAINAKRTADAATQADRAVDDGQRQFDSGLAITRQLAGELARSAQSV 315

Query: 382 EGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQ 441
             LQQ+ + I  V+ VI +IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LASRTQ
Sbjct: 316 SQLQQETQRIDEVVVVISSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQ 375

Query: 442 QSTGEIQGMIDRLQNATSHTVGTMLRAGEKGESTRNHANQAGESLDAISALIGTINSMNA 501
           Q+TGEIQ MI ++Q+  + TV  M  +        N + +    L  ++ L+  I++MN 
Sbjct: 376 QATGEIQKMIQQVQSRVAETVNVMQSSQTLSNQGVNRSEEIKLVLSKVTDLVSNISNMNI 435

Query: 502 QIAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTARELNGLAEQLQRLVGQFRI 561
           +++ AA+EQT V E I+R+++ +A+     + D+   AQ++  L    E+L+ LV  FR+
Sbjct: 436 EVSHAAQEQTCVTEAISRTLNDLANVSGSASLDSEHLAQSSERLFHQGERLRTLVTSFRL 495