Pairwise Alignments

Query, 563 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) from Pseudomonas stutzeri RCH2

Subject, 560 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Xanthomonas campestris pv. campestris strain 8004

 Score =  609 bits (1570), Expect = e-178
 Identities = 306/551 (55%), Positives = 394/551 (71%), Gaps = 4/551 (0%)

Query: 6   WKDKYPVGVSSEINPDEYQNIQAVLKQSCERFADKPAFSNLGKTLTYGELYKLSGDFAAY 65
           W   YP GV++EI+ +++  +  V   S  RFAD+PA+ + GKT+TY E  +L   FAAY
Sbjct: 7   WLQSYPAGVAAEIDLEQFSTVAEVFATSVARFADRPAYHSFGKTITYREADQLVDQFAAY 66

Query: 66  LQQNTDLQPGDRIAVQLPNLIQYPIVVFGAMRAGLIVVNTNPLYTAREMEHQFNDAGAKA 125
           L     L+ GDR+A+ +PN +QYPI  FG +RAGL VVN NPLYT RE++HQ  D+G+  
Sbjct: 67  LLGELQLKKGDRVALMMPNCLQYPIATFGILRAGLTVVNVNPLYTPRELKHQLIDSGSSV 126

Query: 126 LVCLANMAHLAEEVLPKTGIKHVVITEVADMLPPLKRMLVNAVVKHVKKMVPAYSLPKAV 185
           LV + N     ++V+  T +K V+ T + DML   K  LVN VVK+VKK+VP Y +  A+
Sbjct: 127 LVVIDNFGTTVQQVIADTQVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEYRINGAI 186

Query: 186 KLNDALALGRGKPVREALPKSDDVAVLQYTGGTTGVAKGAMLTHRNIVANMLQCKALMG- 244
           +  DALALGR   V     + DD+A LQYTGGTTGVAKGAMLTHRN+VANM Q    +  
Sbjct: 187 RFRDALALGRKHRVPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAG 246

Query: 245 -SNLNDGSEVLIAPLPLYHIYAFTFHCMAMMLSGNHNILISNPRDLPAMIKDLGKYRFSG 303
              L +G EV+I  LPLYHI+A T + +  M  G  N LISNPRD+P  +K+L K RF+ 
Sbjct: 247 TGKLEEGHEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTA 306

Query: 304 FVGLNTLFVALCNSEDFRKLDFSALKVTLSGGMALQLATAERWKQVTGCPICEGYGLTET 363
           F G+NTLF  L N+  F ++DFS+LK+TL GGMA+Q + AERWKQVTG  + E YGLTET
Sbjct: 307 FTGVNTLFNGLLNTPGFDQIDFSSLKMTLGGGMAVQRSVAERWKQVTGLTLVEAYGLTET 366

Query: 364 SPVASVNPIEHIQL-GSIGIPVPSTQFKVINDDGQDLAQGEIGELCIKGPQVMKGYWQRP 422
           SP A +NP++ +   GSIG+P+PST   + +DDG+ LA GEIGELCIKGPQVMKGYW++ 
Sbjct: 367 SPAACINPMDLVDYNGSIGLPIPSTDACIKDDDGKVLALGEIGELCIKGPQVMKGYWKKA 426

Query: 423 EATDEVIDAQGWFKTGDIGVIQEDGYIRIVDRKKDMILVSGFNVYPNELEDVLASLPGVL 482
           + T +V+DA+GW  TGDI  + E G++ IVDRKKDMILVSGFNVYPNE+EDV+A++PGVL
Sbjct: 427 DETAKVMDAEGWLHTGDIARMDERGFVYIVDRKKDMILVSGFNVYPNEIEDVIATMPGVL 486

Query: 483 QSAAIGVPDEKSGEAIKLFVVVKPGESLTKEQVMQHMHDNLTGYKRPKAVEFRDSLPTTN 542
           + AA+GVPDEKSGE +K+ V+VK  ++LT E V  H   NLTGYK+P+ +EFR  LP TN
Sbjct: 487 EVAAVGVPDEKSGEIVKV-VIVKKDQALTAEDVKAHCRTNLTGYKQPRVIEFRKELPKTN 545

Query: 543 VGKILRRELRD 553
           VGKILRRELRD
Sbjct: 546 VGKILRRELRD 556