Pairwise Alignments

Query, 563 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) from Pseudomonas stutzeri RCH2

Subject, 563 a.a., AMP-dependent synthetase and ligase from Pseudomonas syringae pv. syringae B728a

 Score =  941 bits (2431), Expect = 0.0
 Identities = 452/563 (80%), Positives = 512/563 (90%)

Query: 1   MTDNFWKDKYPVGVSSEINPDEYQNIQAVLKQSCERFADKPAFSNLGKTLTYGELYKLSG 60
           M DNFWKDKYP G+ ++INPDEY N+QAVLKQSC+RFADKPAFSNLGKT+TYGELY+LSG
Sbjct: 1   MIDNFWKDKYPSGIPADINPDEYPNVQAVLKQSCQRFADKPAFSNLGKTITYGELYELSG 60

Query: 61  DFAAYLQQNTDLQPGDRIAVQLPNLIQYPIVVFGAMRAGLIVVNTNPLYTAREMEHQFND 120
            FAA++QQ+TDLQPGDRIAVQLPN++QYPI VFGA+RAGLIVVNTNPLYTAREMEHQFND
Sbjct: 61  AFAAWIQQHTDLQPGDRIAVQLPNVLQYPIAVFGAIRAGLIVVNTNPLYTAREMEHQFND 120

Query: 121 AGAKALVCLANMAHLAEEVLPKTGIKHVVITEVADMLPPLKRMLVNAVVKHVKKMVPAYS 180
           +GAKALVCLANMAHLAE+V+P+T I+ V++TEVADML P KR+L+N+V+K+VKKMVPAY 
Sbjct: 121 SGAKALVCLANMAHLAEKVVPRTQIRQVIVTEVADMLSPFKRLLINSVIKYVKKMVPAYH 180

Query: 181 LPKAVKLNDALALGRGKPVREALPKSDDVAVLQYTGGTTGVAKGAMLTHRNIVANMLQCK 240
           LPKA+K ND L  GRG+PV +  P S DVAVLQYTGGTTGVAKGAMLTHRN++ANMLQC+
Sbjct: 181 LPKAIKFNDVLGKGRGQPVTDVSPGSVDVAVLQYTGGTTGVAKGAMLTHRNLIANMLQCR 240

Query: 241 ALMGSNLNDGSEVLIAPLPLYHIYAFTFHCMAMMLSGNHNILISNPRDLPAMIKDLGKYR 300
           ALM SNL++G E++I PLPLYHIYAFTFHCMAMML GNHNILISNPRDLPAM+K+L K++
Sbjct: 241 ALMASNLDEGCEIIITPLPLYHIYAFTFHCMAMMLLGNHNILISNPRDLPAMVKELSKWK 300

Query: 301 FSGFVGLNTLFVALCNSEDFRKLDFSALKVTLSGGMALQLATAERWKQVTGCPICEGYGL 360
           FSGFVGLNTLFVALCNS+ FR LDFSALKVTLSGGMALQ A AERWKQVTGC +CEGYG+
Sbjct: 301 FSGFVGLNTLFVALCNSDGFRNLDFSALKVTLSGGMALQQAAAERWKQVTGCQVCEGYGM 360

Query: 361 TETSPVASVNPIEHIQLGSIGIPVPSTQFKVINDDGQDLAQGEIGELCIKGPQVMKGYWQ 420
           TETSPVA+VNP +++Q+GSIGIPVPST  KVI+D G +LA GE GELCIKGPQVMKGYWQ
Sbjct: 361 TETSPVATVNPSQYVQMGSIGIPVPSTLCKVIDDAGNELAFGETGELCIKGPQVMKGYWQ 420

Query: 421 RPEATDEVIDAQGWFKTGDIGVIQEDGYIRIVDRKKDMILVSGFNVYPNELEDVLASLPG 480
           R EATDE+ID++GW KTGDI +IQ DGYIRIVDRKKDMIL+SGFNVYPNELEDVLA+LPG
Sbjct: 421 RQEATDEMIDSEGWLKTGDIAIIQPDGYIRIVDRKKDMILISGFNVYPNELEDVLATLPG 480

Query: 481 VLQSAAIGVPDEKSGEAIKLFVVVKPGESLTKEQVMQHMHDNLTGYKRPKAVEFRDSLPT 540
           VLQ AAIGVPDEKSGE IK+FVV KPG +LTKEQVM HM  NLTGYK P++VEFRD LPT
Sbjct: 481 VLQCAAIGVPDEKSGETIKVFVVAKPGVTLTKEQVMAHMRANLTGYKVPRSVEFRDVLPT 540

Query: 541 TNVGKILRRELRDEELRKLGHKK 563
           TNVGKILRRELRDEEL+KLG KK
Sbjct: 541 TNVGKILRRELRDEELKKLGVKK 563