Pairwise Alignments

Query, 671 a.a., excinuclease ABC, B subunit from Pseudomonas stutzeri RCH2

Subject, 671 a.a., Excinuclease ABC subunit B from Pseudomonas syringae pv. syringae B728a

 Score = 1186 bits (3068), Expect = 0.0
 Identities = 598/671 (89%), Positives = 637/671 (94%)

Query: 1   MSKFELVTRFKPAGDQPEAIRQMIEGIEAGLSHQTLLGVTGSGKTFSIANVIAHVQRPTL 60
           MS+F+LVTRF+PAGDQPEAIRQ++EGI+AGL+HQTLLGVTGSGKTFSIANVI+ ++RPTL
Sbjct: 1   MSEFQLVTRFEPAGDQPEAIRQLVEGIDAGLAHQTLLGVTGSGKTFSIANVISQIKRPTL 60

Query: 61  VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ 120
           VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
Sbjct: 61  VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ 120

Query: 121 MRLSATKALLERPDAIIVTTVSCIYGLGDPQSYLKMVLHVDRGDRLDQRELLRRLTGLQY 180
           MRLSATKALLER DAIIVTTVSCIYGLG P++YL+MV+H+DRGD+LDQR LLRRL  LQY
Sbjct: 121 MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLRMVMHIDRGDKLDQRALLRRLADLQY 180

Query: 181 TRNDMDFARATFRVRGDVIDIFPAESDLEAVRIELFDDEVESLSAFDPLTGEVIRKLPRF 240
           TRNDMDFARATFRVRGDVIDI+PAESDLEA+R+ELFDDEVESLSAFDPLTGEVIRKLPRF
Sbjct: 181 TRNDMDFARATFRVRGDVIDIYPAESDLEAIRVELFDDEVESLSAFDPLTGEVIRKLPRF 240

Query: 241 TFYPKSHYVTPRETLLDAIEKIKDELRERLDYLRSQNKLVEAQRLEQRTRFDLEMIMELG 300
           TFYPKSHYVTPRETL++A+E IK EL+ERL+YLRSQNKLVEAQRLEQRTRFDLEM++ELG
Sbjct: 241 TFYPKSHYVTPRETLIEAMENIKVELQERLEYLRSQNKLVEAQRLEQRTRFDLEMMLELG 300

Query: 301 YCNGIENYSRYLSGRDAGEPPPTLFDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL 360
           YCNGIENYSRYLSGR +G PPPTLFDYLP DALLVIDESHVSVPQVGAMYKGDRSRKETL
Sbjct: 301 YCNGIENYSRYLSGRPSGAPPPTLFDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL 360

Query: 361 VEYGFRLPSALDNRPMRFDEWEAICPQTIFVSATPGPYEAEHAGRVVEQVVRPTGLVDPQ 420
           VEYGFRLPSALDNRPMRFDEWEAI PQTIFVSATPG YEAEHAGR+VEQVVRPTGLVDPQ
Sbjct: 361 VEYGFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHAGRIVEQVVRPTGLVDPQ 420

Query: 421 IEVRPALTQVDDLLSEIRKCVVKEERVLVTTLTKRMAEDLTDYLSDHDVRVRYLHSDIDT 480
           IE+RPALTQVDDLLSEI K    EERVLVTTLTKRM+EDLTDYLSDH VRVRYLHSDIDT
Sbjct: 421 IEIRPALTQVDDLLSEIHKRAALEERVLVTTLTKRMSEDLTDYLSDHGVRVRYLHSDIDT 480

Query: 481 VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA 540
           VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRS+RSLIQTIGRA
Sbjct: 481 VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSDRSLIQTIGRA 540

Query: 541 ARNLNGRAILYADNVTGSMQRAMDETERRRNKQIAFNEANGIVPKGVTKDVRDILEGATV 600
           ARNLNGRAILYAD +TGSM+RA+ ETERRR KQIAFN  +GI PKGV KDV DI+EGATV
Sbjct: 541 ARNLNGRAILYADRITGSMERAIGETERRREKQIAFNLEHGITPKGVFKDVADIMEGATV 600

Query: 601 PGSRSKKRRGEAKAAEESARYENELRSPSEITKRIRQLEEKMLSLARDLEFEAAAEARDE 660
           PGSRSKKR+G AKAAEE+ARYENELRSPSEI KRIRQLEEKM  LARDLEFEAAA+ RDE
Sbjct: 601 PGSRSKKRKGMAKAAEENARYENELRSPSEINKRIRQLEEKMYQLARDLEFEAAAQMRDE 660

Query: 661 IHKLRERLLQV 671
           I KLRERLL V
Sbjct: 661 IGKLRERLLAV 671