Pairwise Alignments

Query, 735 a.a., TonB-dependent copper receptor from Pseudomonas stutzeri RCH2

Subject, 668 a.a., TonB-dependent receptor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  398 bits (1022), Expect = e-115
 Identities = 252/721 (34%), Positives = 366/721 (50%), Gaps = 80/721 (11%)

Query: 35  LGMLASGVLAADADHSG-HAEHADAVELAP----MVITGVGQQSPLTVVTDPKIPRQPMP 89
           L ++ + +L   A   G  AE  D  E       +++T    + P+ +V+DPK  R P+P
Sbjct: 8   LALMLASILGTTAPQLGWSAEATDCGEDQKCKDYLLVTADVMRQPVHLVSDPKQNRLPLP 67

Query: 90  ASDGADYLKTIPGFSAVRNGGVNGDPVFRGMFGSRLKLLSNGGEMLGACPNRMDSPSSYI 149
           A DG+ +L++IPGF+  R GG  GDP+FRG  GSRL ++ +G  + GAC  RMD P++YI
Sbjct: 68  AYDGSGFLRSIPGFNITRKGGSGGDPMFRGQGGSRLNIVDDGQHVYGACGGRMDPPTNYI 127

Query: 150 SPDTFDKLTVIKGPQTVLWGPGASAATVLFEREPEQFSEPDYRINGSLLTASNGRFDRNL 209
            P+T+D++TVIKGPQTV +GP  +A T+LFE+   +F++ D     S    S  R D  +
Sbjct: 128 YPETYDQITVIKGPQTVKYGPVGTAGTILFEKNRHRFNQADLEGRASATGGSFDRRDAMV 187

Query: 210 DAAAGNSQGYARLMANSSQADDYADGNGDTVPSRYDKWNTDVALGWTPDEDTLIELTAGR 269
           +  AG+   Y     N S +D Y DGNG+ V S YD+ N+++ALGWTP E T++EL  G 
Sbjct: 188 ELNAGDKNYYLDFDINQSSSDHYQDGNGNKVQSSYDRQNSNLALGWTPTERTVVELAYGE 247

Query: 270 GDGYARYAGRGMDGSQFQRESLGLRFEKSNIGETFYGLEAQVYYNYADHIMDNYSLRDFV 329
             G A YA R     Q       L  +          +E Q + N  DHIMD +      
Sbjct: 248 SSGEAEYADRLNKARQIDNRDAALLIQHEFESSWLAAVELQAFSNKNDHIMDRFD----- 302

Query: 330 PTSMMKVPTLSRVDRRTLGGRLVGTWQWTD------VELKAGVDAQRSEH--RKVMNPNL 381
                 V + S V R T GG L     W D      +EL  G+D   S H  R +   ++
Sbjct: 303 ----EGVNSGSNVRRMTDGGHL-----WFDLTPLDALELTLGLDYMSSVHDGRSMATGDV 353

Query: 382 HVNQMVAAAGSDALPWVPDAMLHSYGVFGELTWQLSER----EKLISGLRLDLHEATDER 437
            ++ ++        P+  D    +YG+F E  +    +      L +GLR+D  +     
Sbjct: 354 GLDDLLNK------PFKEDMRYKNYGLFAESRYGFDNQGVGNSSLHAGLRVDRWDGE--- 404

Query: 438 DYFNSHHPTLKNGMGMPVSQDWDNPTAGETRRDTLYSGFVRYEEELTSVPATWYAGLGHA 497
                          + ++Q  +       R DTLYSG+VRYE +L +    +YAG G A
Sbjct: 405 ---------------LLIAQQGE-------REDTLYSGYVRYEYQLDA--HQYYAGFGSA 440

Query: 498 QRFPDYWELF---VSNPGPVGTVQSFDSVRPEKTTQLDVGLQYAKGPLEAWVSAYAGVVE 554
           QR PDYWE+      NP      ++FD ++ E T Q D+G  Y +GP+EA VS + G + 
Sbjct: 441 QRMPDYWEIMKASADNPAQ----KAFD-LKAETTNQFDIGWIY-QGPVEASVSLFYGEIN 494

Query: 555 DYILFSYVPGVMPGMLRAEVSNIDATIAGAEMGASYRFTSNWKGDASLAYAWGKNRSDDR 614
           DYIL                 NIDA++ G E    Y     W    +L+Y  G+N +D  
Sbjct: 495 DYILIDSTSNT------TVARNIDASLFGGEASLDYALNEQWSTQLTLSYTHGENDTDKV 548

Query: 615 AMPQIPPLEGRLGLTYERDNWSTSGLWRVVAAQSRVAENQGTVVGKDFDESAGFGVLAVN 674
           A+ QI PLE RL + Y+   W+ +  WR+VA+Q R     G +VG+D   S+GFG LA+N
Sbjct: 549 ALGQISPLEARLTVNYQWQAWTMAAQWRLVASQDRYTLGHGNIVGQDLGPSSGFGTLALN 608

Query: 675 GAYRLNKNFKLSAGVDNLLDKAYSEHLNLAGSAGFADYGLEPTSRVNEPGRTYWARVDMS 734
            ++  +K+     GV+NL D  Y+EH++ AG+      G E   RVNEPGR  WA++   
Sbjct: 609 ASWSYSKDLSFIFGVENLFDATYAEHVSKAGTGNDLP-GSEAMFRVNEPGRNLWAKLTYQ 667

Query: 735 F 735
           F
Sbjct: 668 F 668