Pairwise Alignments

Query, 505 a.a., Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains from Pseudomonas stutzeri RCH2

Subject, 662 a.a., AAA family ATPase from Klebsiella michiganensis M5al

 Score =  243 bits (620), Expect = 2e-68
 Identities = 139/309 (44%), Positives = 193/309 (62%), Gaps = 7/309 (2%)

Query: 199 LIGDSPRMRAVYQLIGKVLHSPVNVLLTGETGTGKELVARAIHDCGFRRSKPFVVQNCAS 258
           ++G S  M+ +      V  S   VLLTGE+GTGKEL A++IH+   R + PF+  NC +
Sbjct: 342 ILGQSRVMQDMRNKARSVGRSDSTVLLTGESGTGKELFAQSIHNGSHRNAGPFLAVNCGA 401

Query: 259 LPEQLLESELFGYRKGAFTGADRDR-SGLLDAANGGTLFLDEIGDMPLLLQAKLLRVLQE 317
           +P  L++SELFGY  GAFTG+ R   +G  + A+GGTLFLDEIGDMPL  QA LLRVLQE
Sbjct: 402 IPRDLVQSELFGYEDGAFTGSRRGGVAGKFELADGGTLFLDEIGDMPLEAQASLLRVLQE 461

Query: 318 GEVRPLGSTETHKVDVRIVAATHRDLRSQVENGLFREDLFYRLSHFPIELPPLRERDEDI 377
           GEV  +G     KV+VRI+AAT+RDL+  +E+G FR DL++RL+   + +PPLRER EDI
Sbjct: 462 GEVMRIGGKRPLKVNVRIIAATNRDLKKDIEHGSFRRDLYFRLNVISLPIPPLRERKEDI 521

Query: 378 LRLARHFADKACAFLQRDLCRWSDAALERLAGYAFPGNVRELKGLVERAVLLCEGGEL-- 435
             L   F +K C  L R+   +SD+AL+ +  Y +PGNVREL+ +VER + L E  E+  
Sbjct: 522 KELTDWFCEKVCRALGRNRALFSDSALKVMESYDWPGNVRELENIVERTINLTEIEEIRD 581

Query: 436 --LPE--HLNLHVEASLDSSLNLRERMERVERSLLMDCLRKNGGNQSQAARELGLPRRTL 491
             LPE  HL  + ++ +         ++  E++L+  CL +  GN  Q A  L L R  L
Sbjct: 582 KDLPEELHLPTYSDSEIPGWSTKNYCLKDSEKTLIERCLVEKQGNLRQVAIALNLSRGAL 641

Query: 492 LYRMERLNI 500
             +++R  I
Sbjct: 642 YNKLKRYGI 650