Pairwise Alignments

Query, 303 a.a., protein-export membrane protein, SecD/SecF family from Pseudomonas stutzeri RCH2

Subject, 301 a.a., protein-export membrane protein SecF (RefSeq) from Shewanella amazonensis SB2B

 Score =  187 bits (476), Expect = 2e-52
 Identities = 112/279 (40%), Positives = 167/279 (59%), Gaps = 6/279 (2%)

Query: 3   RVINFMGVRHVAFALTVLLTVASLASLVVKGLNFGLDFTGGTLIELGYERPVELEQVRGQ 62
           + +NF   RH+   ++V+  + S+ ++  +G N GLDFTGG   E+       +++V   
Sbjct: 2   KTLNFTRFRHLMTLISVVALLLSVLAISTRGFNLGLDFTGGAFAEVAMATDTRIDEVETA 61

Query: 63  LVQAGFADAVVQSFGATTDVLVRMPG--DDPQLGERVASALRNADSGNSVSVKRVEFVGP 120
           L   G     V +       L+RM G  D   L +   S L+      ++ V   + V P
Sbjct: 62  LAHLGDGSISVVATEPGR-FLIRMGGTLDAHTLADFNQSLLQ---LDPTMQVLDRDSVSP 117

Query: 121 AVGEELRDQGGLGMLLALGGILVYVAFRFQWKFGLGAVLSLFHDVILVLGVFSFFQISFD 180
            VG+EL +QGGL +L+A+  IL Y++ RF+W+   GA+++L HDV+LVLGVF+   + F+
Sbjct: 118 QVGQELFEQGGLALLIAMLCILGYLSLRFEWRLAAGALVALVHDVVLVLGVFALTGMEFN 177

Query: 181 LTVLAAVLAVIGYSLNDTIVIFDRIRENFRMLRKAELLENINISTTQTLLRTVATSVSTL 240
           LTVLAAVLAV+GYSLND+I+I DRIRE      K+ L E  + +  QT  RT+ TS +TL
Sbjct: 178 LTVLAAVLAVLGYSLNDSIIIADRIRELLLARPKSRLTEVNDAAIVQTFSRTMVTSGTTL 237

Query: 241 LAVGALMVFGGENLWGFSLALLIGVGAGTYSSVYVAGML 279
           + VGAL + GG  L GF++A+ +G+  GT+SSV V  +L
Sbjct: 238 ITVGALWLLGGAPLEGFAVAMFVGIVTGTFSSVSVGTVL 276