Pairwise Alignments

Query, 303 a.a., protein-export membrane protein, SecD/SecF family from Pseudomonas stutzeri RCH2

Subject, 372 a.a., protein translocase subunit SecF from Rhodopseudomonas palustris CGA009

 Score =  217 bits (552), Expect = 4e-61
 Identities = 114/283 (40%), Positives = 181/283 (63%), Gaps = 7/283 (2%)

Query: 6   NFMGVRHVAFALTVLLTVASLASLVVKGLNFGLDFTGGTLIEL-GYERPVELEQVRGQLV 64
           +F   R ++F ++ +L++A++      GLNFG+DF GGTL+E+  +    ++  +R  L 
Sbjct: 38  DFTRFRRISFPISAVLSIAAITLFFTHGLNFGIDFRGGTLLEVRAHSGAADIAGMRDTLS 97

Query: 65  QAGFADAVVQSFGATTDVLVRM---PGDDPQLGERVASALRNADSGNSVSVKRVEFVGPA 121
           +    D  +Q FG   +VL+R+   PG D    ++VA     A  G+SV  +RVE VGP 
Sbjct: 98  KLSLGDVQLQQFGGPAEVLIRIAEQPGGDQ--AQQVAVQKVRAALGDSVDYRRVEVVGPR 155

Query: 122 VGEELRDQGGLGMLLALGGILVYVAFRFQWKFGLGAVLSLFHDVILVLGVFSFFQISFDL 181
           V  EL   G LG+++A+ GILVY+ FRF+W+F LGA+++  HD++L +G  S  Q+ FDL
Sbjct: 156 VSSELLAFGMLGLMVAILGILVYLWFRFEWQFALGAMIANVHDIVLTIGFMSISQVDFDL 215

Query: 182 TVLAAVLAVIGYSLNDTIVIFDRIRENFRMLRKAELLENINISTTQTLLRTVATSVSTLL 241
           T +AA+L ++GYSLNDT+VI+DRIRE  R  +K  + + +N S   TL R++ T V+  L
Sbjct: 216 TSIAALLTILGYSLNDTVVIYDRIREMLRRYKKMPMPQLLNESINSTLSRSIITHVTVTL 275

Query: 242 AVGALMVFGGENLWGFSLALLIGVG-AGTYSSVYVAGMLLVWL 283
           A+ AL++FGG  +  F+  ++ GV   GTY+S+++A  +L++L
Sbjct: 276 ALLALLLFGGHAIHSFTAVMMFGVVLVGTYTSIFIAAPILIYL 318