Pairwise Alignments

Query, 303 a.a., protein-export membrane protein, SecD/SecF family from Pseudomonas stutzeri RCH2

Subject, 361 a.a., preprotein translocase subunit SecF (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  178 bits (451), Expect = 2e-49
 Identities = 114/347 (32%), Positives = 185/347 (53%), Gaps = 55/347 (15%)

Query: 6   NFMGVRHVAFALTVLLTVASLASLVVKG-LNFGLDFTGGTLIELGYERPVELEQVRGQLV 64
           +F+G+RH A+ ++++L +  L S+V KG L +G+DF GG ++++ ++RPV  + ++  L 
Sbjct: 13  DFVGMRHKAYVISIVLILVGLLSIVFKGGLTYGIDFAGGAIVQVKFDRPVADDTLKKSLE 72

Query: 65  QAGFADAVVQSFG-ATTDVLVRMPGDDPQLGERVASALRNADSGN----SVSVKRVEFVG 119
            A      VQ FG   TD L+R+   D +  E + +A+  A + N    +  V+R+E VG
Sbjct: 73  SASLPGLAVQRFGEGETDYLIRISHSD-ESAEAIRTAVTGALTANIKDATFEVQRLEMVG 131

Query: 120 PAVGEELRDQGGLGMLLALGGILVYVAFRFQ----------------------------- 150
           P VG +L+ +    +  A+  I +Y++ RF+                             
Sbjct: 132 PKVGADLKSKAVEALYYAVLLIAIYISGRFERRWMASAVMAGTLAGGMYLLGLVGVPRLW 191

Query: 151 -------------WK----FGLGAVLSLFHDVILVLGVFSFFQISFDLTVLAAVLAVIGY 193
                        WK    F LGA+++L HDV++ +GV S      DL ++AA+L ++GY
Sbjct: 192 LVPFSLVLTLVLCWKLRLNFALGAIVALVHDVLITMGVLSLLNKEVDLNIVAAILTLVGY 251

Query: 194 SLNDTIVIFDRIRENFRMLRKAELLEN-INISTTQTLLRTVATSVSTLLAVGALMVFGGE 252
           SLNDTI+++DRIRE  R  RK     + IN S  QTL RT+ T  +TL+ + AL V GG 
Sbjct: 252 SLNDTIIVYDRIRETLRTHRKEWTYAHIINASINQTLSRTILTGGTTLVVILALYVLGGG 311

Query: 253 NLWGFSLALLIGVGAGTYSSVYVAGMLLVWLKLTRDDLIP-PVVEEE 298
            +  F+L +L+GV  G  SS++VA  +L+   +  ++  P P V +E
Sbjct: 312 VIHDFALTMLVGVFVGILSSIFVASPVLLHFGMPEEEKEPAPRVGQE 358