Pairwise Alignments

Query, 303 a.a., protein-export membrane protein, SecD/SecF family from Pseudomonas stutzeri RCH2

Subject, 320 a.a., protein-export membrane protein SecF (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  186 bits (471), Expect = 8e-52
 Identities = 112/299 (37%), Positives = 169/299 (56%), Gaps = 14/299 (4%)

Query: 6   NFMGVRHVAFALTVLLTVASLASLVVKGLNFGLDFTGGTLIELGYERPVELEQVRGQLVQ 65
           +F     +    + +  VASL   +  GLNFG+DF GGT I     + V++   R  +  
Sbjct: 13  DFFKYVRLTLGASAVAMVASLVLWLSVGLNFGIDFLGGTTIRTESAQVVDVAAYRAAVEP 72

Query: 66  AGFADAVVQ-----SFGATTDV-LVRMPGDD------PQLGERVASALRNADSGNSVSVK 113
            G  D  +      +FG   +V ++R+   +      P+    +  ALR  D    ++  
Sbjct: 73  LGLGDISITEVFDPTFGPERNVAMLRIQAQEGQESVPPETILAIEEALRTVDP--EMTFP 130

Query: 114 RVEFVGPAVGEELRDQGGLGMLLALGGILVYVAFRFQWKFGLGAVLSLFHDVILVLGVFS 173
            VE VGP V  EL     L +  ++  IL Y+  RF+W+F +GA+ +L HDV+L +G+FS
Sbjct: 131 SVESVGPKVSGELILTAMLAVGASMVAILFYIWLRFEWQFSIGAIAALVHDVVLTIGIFS 190

Query: 174 FFQISFDLTVLAAVLAVIGYSLNDTIVIFDRIRENFRMLRKAELLENINISTTQTLLRTV 233
             QI FDL  +AA+L +IGYS+NDT+VIFDR+REN    +K  L + +N+S  +TL RTV
Sbjct: 191 LLQIRFDLATIAALLTIIGYSINDTVVIFDRLRENLIKYKKKPLRDVMNLSVNETLSRTV 250

Query: 234 ATSVSTLLAVGALMVFGGENLWGFSLALLIGVGAGTYSSVYVAGMLLVWLKLTRDDLIP 292
            TS +TLLA+ AL+  GG+ + GF  A+  G+  GTYSSV+VA  +++ L + R+   P
Sbjct: 251 MTSGTTLLALLALLALGGDVIRGFVFAIFWGIIVGTYSSVFVAKNIVLLLGVNREPKDP 309